neurobiology-ut / PHILOWLinks
Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets
☆26Updated 5 months ago
Alternatives and similar repositories for PHILOW
Users that are interested in PHILOW are comparing it to the libraries listed below
Sorting:
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆28Updated 3 months ago
- Optimize image processing workflows in napari☆18Updated 3 months ago
- Panoptic segmentation algorithms for 2D and 3D electron microscopy in napari☆23Updated 3 months ago
- ☆46Updated 3 weeks ago
- StarDist plugin for napari☆40Updated 11 months ago
- Feature extraction for labeled objects in images using regionprops from scikit-image☆51Updated 3 months ago
- Accelerated Pixel and Object Classifiers (APOC)☆56Updated 2 weeks ago
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆18Updated 3 months ago
- A template repo used to make new napari plugins☆26Updated last week
- ☆51Updated 3 months ago
- A napari plugin for clustering objects according to their properties.☆87Updated last week
- Process and analyze surfaces using vedo in napari.☆24Updated last year
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆30Updated last week
- Tools for handling FIB-SEM data and annotations☆22Updated 4 months ago
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆55Updated 9 months ago
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆43Updated 3 months ago
- Multiple file format reading directly into napari using pure Python☆37Updated last year
- GPU-accelerated general purpose image processing and image analysis in napari☆35Updated 3 months ago
- Track and lineage visualization with btrack and Napari☆45Updated 9 months ago
- MultiModal Big Image Data Sharing and Exploration☆16Updated 2 years ago
- 3D shape analysis using deep learning☆25Updated last year
- Process images using SimpleITK in napari☆21Updated 3 months ago
- dask empowered fast4dreg☆11Updated 8 months ago
- Benchmarking Large Language Models for Bio-Image Analysis Code Generation☆23Updated 8 months ago
- Affinity based segmentation algorithms and tools☆10Updated 2 months ago
- Napari gaming☆17Updated 3 years ago
- ☆13Updated 5 years ago
- Visualizing feature measurements on label images in napari☆10Updated last year
- A napari plugin to view and edit metadata☆10Updated 2 years ago
- ☆13Updated 5 years ago