Alternatives and similar repositories for NanoPyx

Users that are interested in NanoPyx are comparing it to the libraries listed below

• BiAPoL / napari-clusters-plotter
  A napari plugin for clustering objects according to their properties.
  ☆88Updated this week
• rosalindfranklininstitute / RedLionfish
  ☆36Updated last year
• multiview-stitcher / multiview-stitcher
  A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.
  ☆99Updated this week
• haesleinhuepf / devbio-napari
  ☆51Updated 7 months ago
• HenriquesLab / DL4MicEverywhere
  Bringing the ZeroCostDL4Mic experience running everywhere via easy-to-install docker images
  ☆83Updated last month
• CellMigrationLab / Fast4DReg
  Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…
  ☆40Updated 8 months ago
• haesleinhuepf / napari-skimage-regionprops
  Feature extraction for labeled objects in images using regionprops from scikit-image
  ☆55Updated 7 months ago
• stardist / stardist-napari
  StarDist plugin for napari
  ☆38Updated last year
• haesleinhuepf / napari-accelerated-pixel-and-object-classification
  GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.
  ☆45Updated 7 months ago
• AllenCellModeling / napari-aicsimageio
  Multiple file format reading directly into napari using pure Python
  ☆39Updated 2 months ago
• MouseLand / cellpose-napari
  napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool
  ☆61Updated last year
• krentzd / napari-clemreg
  An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)
  ☆19Updated 2 months ago
• haesleinhuepf / apoc
  Accelerated Pixel and Object Classifiers (APOC)
  ☆59Updated 5 months ago
• napari / napari-plugin-template
  A template repo used to make new napari plugins
  ☆30Updated 3 weeks ago
• NEUBIAS / training-resources
  Resources for teaching/preparing to teach bioimage analysis
  ☆58Updated last month
• UU-cellbiology / BigTrace
  FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets
  ☆29Updated last month
• JaneliaSciComp / bigstream
  Tools for distributed alignment of massive images
  ☆90Updated last week
• bioio-devs / bioio
  Image reading, metadata management, and image writing for Microscopy images in Python
  ☆110Updated this week
• weigertlab / spotiflow
  Accurate and efficient spot detection for microscopy data
  ☆113Updated 3 weeks ago
• clEsperanto / napari_pyclesperanto_assistant
  GPU-accelerated general purpose image processing and image analysis in napari
  ☆36Updated 7 months ago
• kreshuklab / go-nuclear
  Guides and code for 3D nuclear instance segmentation
  ☆22Updated 3 weeks ago
• weigertlab / trackastra
  Transformer-based cell tracking for live-cell microscopy
  ☆119Updated 2 weeks ago
• clEsperanto / pyclesperanto
  GPU-accelerated Image Processing library for Python
  ☆52Updated last week
• tlambert03 / pycudadecon
  Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy
  ☆71Updated 3 weeks ago
• haesleinhuepf / napari-segment-blobs-and-things-with-membranes
  A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…
  ☆30Updated 7 months ago
• napari / napari-animation
  A napari plugin for making animations
  ☆89Updated 3 weeks ago
• BiAPoL / PoL-BioImage-Analysis-TS-GPU-Accelerated-Image-Analysis
  PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track
  ☆28Updated last year
• tlambert03 / microsim
  ☆42Updated last week
• haesleinhuepf / stackview
  Interactive image stack viewing in jupyter notebooks based on ipycanvas and ipywidgets
  ☆174Updated 7 months ago
• lowe-lab-ucl / arboretum
  Track and lineage visualization with btrack and Napari
  ☆45Updated 2 months ago