HenriquesLab / NanoPyxLinks
Nanoscopy library for Python (NanoPyx, the successor to NanoJ) - focused on light microscopy and super-resolution imaging
☆80Updated last week
Alternatives and similar repositories for NanoPyx
Users that are interested in NanoPyx are comparing it to the libraries listed below
Sorting:
- A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆73Updated this week
- A napari plugin for clustering objects according to their properties.☆85Updated last week
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆39Updated last month
- ☆49Updated last month
- Accelerated Pixel and Object Classifiers (APOC)☆56Updated 3 months ago
- A platform for compiling, analyzing, and exploring tracking data☆44Updated 2 months ago
- MSSR Plugin☆13Updated 7 months ago
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆26Updated last month
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆26Updated 3 months ago
- ☆41Updated this week
- Bringing the ZeroCostDL4Mic experience running everywhere via easy-to-install docker images☆77Updated last month
- Lectures for a napari training course☆50Updated last year
- ☆23Updated 3 weeks ago
- Tools for distributed alignment of massive images☆81Updated last month
- Segmentation method able to detect membrane/nuclei-labelled cells with low signal-to-noise ratio and dense packing in 2D and 3D. Availabl…☆33Updated 2 months ago
- GPU-accelerated general purpose image processing and image analysis in napari☆35Updated last month
- Automated mitochondrial segmentation and tracking.☆32Updated 3 years ago
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆43Updated last month
- Deconvolution of widefield microscopy images and generation of point spread functions☆47Updated last week
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆29Updated last month
- ☆81Updated 2 months ago
- Z-stack Depth Colorcode ImageJ FIJI plugin☆24Updated 4 years ago
- StarDist plugin for napari☆38Updated 9 months ago
- "Defragmentation: bringing BioImage Analysts to the cloud!” training school for the new generation of bioimage analysts. Topics: workflow…☆15Updated 2 years ago
- ☆29Updated last year
- PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track☆26Updated last year
- Running compute-intense parts of BigStitcher distributed☆26Updated last week
- A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification☆23Updated 3 years ago
- Browse your OMERO database from within napari.☆37Updated this week
- Track and lineage visualization with btrack and Napari☆45Updated 7 months ago