clEsperanto / pyclesperanto
GPU-accelerated Image Processing library for Python
☆36Updated this week
Alternatives and similar repositories for pyclesperanto:
Users that are interested in pyclesperanto are comparing it to the libraries listed below
- Accelerated Pixel and Object Classifiers (APOC)☆55Updated 3 weeks ago
- Segmentation method able to detect membrane/nuclei-labelled cells with low signal-to-noise ratio and dense packing in 2D and 3D. Availabl…☆33Updated 3 months ago
- ☆21Updated last year
- ☆23Updated 5 months ago
- Visualizing feature measurements on label images in napari☆10Updated 7 months ago
- A napari plugin for zarr backed OME-NGFF images☆32Updated last week
- ilastik plugin for napari☆14Updated 10 months ago
- Command-line client for Fractal☆45Updated this week
- A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…☆21Updated 2 months ago
- A 3D interactivity toolbox for napari☆33Updated 3 months ago
- Process images using SimpleITK in napari☆20Updated 5 months ago
- Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.☆42Updated last month
- Benchmarking Large Language Models for Bio-Image Analysis Code Generation☆23Updated 3 months ago
- StarDist plugin for napari☆37Updated 6 months ago
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆43Updated last year
- Quickly find the affine matrix mapping one image to another using manual correspondence points annotation☆19Updated 8 months ago
- PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track☆25Updated 9 months ago
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆52Updated 4 months ago
- ☆24Updated 3 months ago
- A napari plugin for clustering objects according to their properties.☆82Updated last week
- Cookiecutter for napari plugins☆69Updated 4 months ago
- ☆35Updated this week
- A module with convenience functions for writing Python code that interacts with OMERO.☆41Updated 4 months ago
- GPU-accelerated general purpose image processing and image analysis in napari☆35Updated 4 months ago
- Process and analyze surfaces using vedo in napari.☆24Updated 10 months ago
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆26Updated 3 months ago
- Python libraries for loading, running and packaging bioimage.io models☆30Updated last week
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆16Updated this week
- A minimal Python package for reading OME-Zarr (meta)data☆23Updated last week
- Pythonic and parallelizable I/O for N-dimensional imaging data with OME metadata☆34Updated this week