Alternatives and similar repositories for mmv_im2im

Users that are interested in mmv_im2im are comparing it to the libraries listed below

• stardist / augmend
  simple package for augmentation of n-dimensional arrays
  ☆33Updated last year
• AllenCell / aics-ml-segmentation
  ☆32Updated 2 years ago
• haesleinhuepf / apoc
  Accelerated Pixel and Object Classifiers (APOC)
  ☆56Updated 4 months ago
• MouseLand / cellpose-napari
  napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool
  ☆54Updated 8 months ago
• AntonotnaWang / 3DCellSeg
  Official implementation of "A novel deep learning-based 3D cell segmentation framework for future image-based disease detection". (Howeve…
  ☆22Updated 2 years ago
• AllenCellModeling / cyto-dl
  ☆25Updated 2 weeks ago
• haesleinhuepf / napari-accelerated-pixel-and-object-classification
  GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.
  ☆43Updated 2 months ago
• funkelab / linajea
  ☆18Updated 2 years ago
• stegmaierj / Cellpose3D
  3D Extension of the Cellpose Algorithm by Stringer et al., 2021.
  ☆35Updated 2 years ago
• kreshuklab / MorphoFeatures
  MorphoFeatures code and data
  ☆21Updated 2 years ago
• constantinpape / elf
  Utils and convenience functions for large-scale bio-image analysis.
  ☆57Updated 3 weeks ago
• GuillaumeMougeot / biom3d
  Easy Volumetric Segmentation with Deep Learning
  ☆26Updated 2 months ago
• mehta-lab / VisCy
  computer vision models for single-cell phenotyping
  ☆60Updated this week
• AllenCell / aics-segmentation
  Part 1 of Allen Cell and Structure Segmenter: classic image segmentation workflow
  ☆26Updated 11 months ago
• bioimage-io / archive.bioimage.io
  Website for the BioImage Model zoo -- a model zoo for bioimage analysis.
  ☆60Updated 2 weeks ago
• aelefebv / nellie
  Nellie: Automated organelle segmentation, tracking, and hierarchical feature extraction in 2D/3D live-cell microscopy
  ☆73Updated 3 months ago
• BiAPoL / napari-clusters-plotter
  A napari plugin for clustering objects according to their properties.
  ☆87Updated last week
• volume-em / empanada
  Panoptic segmentation algorithms for 2D and 3D electron microscopy images
  ☆2Updated 2 years ago
• Kapoorlabs-CAPED / VollSeg
  Segmentation method able to detect membrane/nuclei-labelled cells with low signal-to-noise ratio and dense packing in 2D and 3D. Availabl…
  ☆33Updated 3 months ago
• NEUBIAS / training-resources
  Resources for teaching/preparing to teach bioimage analysis
  ☆58Updated last week
• HenriquesLab / NanoPyx
  Nanoscopy library for Python (NanoPyx, the successor to NanoJ) - focused on light microscopy and super-resolution imaging
  ☆80Updated last week
• uhlmanngroup / splinedist
  SplineDist: Automated Cell Segmentation with Spline Curves
  ☆67Updated 9 months ago
• HenriquesLab / DL4MicEverywhere
  Bringing the ZeroCostDL4Mic experience running everywhere via easy-to-install docker images
  ☆80Updated 2 months ago
• weigertlab / trackastra
  Transformer-based cell tracking for live-cell microscopy
  ☆75Updated last month
• WenChentao / 3DeeCellTracker
  A python algorithm for tracking cells in 3D time lapse images.
  ☆60Updated 3 months ago
• SuperElastix / elastix-napari
  A napari plugin for itk-elastix
  ☆38Updated last year
• clEsperanto / napari_pyclesperanto_assistant
  GPU-accelerated general purpose image processing and image analysis in napari
  ☆35Updated 2 months ago
• stardist / stardist-napari
  StarDist plugin for napari
  ☆38Updated 10 months ago
• napari / napari-plugin-template
  A template repo used to make new napari plugins
  ☆26Updated last week
• abcucberkeley / PetaKit5D
  ☆45Updated last week