AliciaMstt / TallerBioinf
Taller práctico de bioinformática Posgrado en Ciencias Biológicas UNAM
☆17Updated 4 years ago
Alternatives and similar repositories for TallerBioinf:
Users that are interested in TallerBioinf are comparing it to the libraries listed below
- Curso de introducción a la bioinformática e investigación reproducible☆26Updated 3 years ago
- Find endogenous viral elements in genomes☆10Updated last week
- Metatranscriptomics Tutorial☆60Updated last year
- 🍄 Qiime2 ITS classifiers for the UNITE database☆36Updated 6 months ago
- Assessing the quality of metagenome-derived genome bins using machine learning☆192Updated 7 months ago
- A python pipeline to identify IS (Insertion Sequence) elements in genome and metagenome☆88Updated last year
- MOB-suite: Software tools for clustering, reconstruction and typing of plasmids from draft assemblies☆134Updated 3 months ago
- r package for post-clustering curation of amplicon next generation sequencing data (metabarcoding)☆63Updated last year
- MuDoGeR makes the recovery of genomes from prokaryotes, viruses, and eukaryotes from metagenomes easy.☆88Updated 5 months ago
- ☆49Updated 4 years ago
- fast phage annotation program☆152Updated last week
- BSR-Based Allele Calling Algorithm☆139Updated last week
- MitoZ: A toolkit for assembly, annotation, and visualization of animal mitochondrial genomes☆120Updated 2 months ago
- geNomad: Identification of mobile genetic elements☆207Updated this week
- ☆95Updated 7 months ago
- Scan contig files against PubMLST typing schemes☆210Updated 2 years ago
- Analyze changes in gene family size and provide a statistical foundation for evolutionary inferences.☆115Updated 3 years ago
- Classification of Eukaryotic and Prokaryotic sequences from metagenomic datasets☆69Updated 7 months ago
- ARGs-OAP: Online Analysis Pipeline for Antibiotic Resistance Genes Detection from Metagenomic Data Using an Integrated Structured ARG Dat…☆50Updated 10 months ago
- A toolbox for identifying mobile genetic element (MGE) insertions from short-read sequencing data of bacterial isolates.☆114Updated last year
- A toolbox for comparative genomics.☆100Updated 3 years ago
- Scripts and tutorials on how to assemble individual microbial genomes from metagenomes☆80Updated 8 years ago
- This is the source code for multisamples ARGs profiling using SARG2.0 database☆46Updated 3 years ago
- All of my various bioinformatic scripts fit for public consumption (loosely defining "fit")☆71Updated last year
- Reference-quality genome reconstruction from complex metagenomes (or bacterial isolates) using only Nanopore long reads or both long and …☆30Updated last year
- An updated pipeline for pangenome investigation☆275Updated 3 months ago
- ☆59Updated 5 years ago
- Automated long-read first bacterial genome assembly tool implemented in Snakemake using Snaketool.☆113Updated this week
- Massively parallel phylogenetic placement of genetic sequences☆80Updated 2 years ago