remove single cells Doublets by integrating tools!
☆22Jun 3, 2022Updated 4 years ago
Alternatives and similar repositories for Chord
Users that are interested in Chord are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- SIDISH: Semi-supervised Iterative Deep Learning for Identifying Single-cell High-risk Populations☆23Jan 23, 2026Updated 4 months ago
- ☆12Mar 22, 2024Updated 2 years ago
- A tool for identifying Phenotype-Associated cell Subpopulations from single-cell sequencing data by integrating bulk data☆19Jan 16, 2026Updated 4 months ago
- weighted indexes for clustering evaluation☆15Apr 18, 2020Updated 6 years ago
- Benchmarking computational doublet-detection methods for single-cell RNA sequencing data☆10Feb 25, 2021Updated 5 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆21Nov 9, 2023Updated 2 years ago
- A tutorial for the analysis of high-dimensional flow cytometry data☆28Aug 28, 2019Updated 6 years ago
- popsicleR, a flexible R package aimed at providing most of the necessary quality controls and preliminary information for complete and de…☆25Dec 3, 2025Updated 6 months ago
- ☆13Dec 15, 2021Updated 4 years ago
- Homepage for YuLab-SMU☆14May 25, 2026Updated 2 weeks ago
- HTSlib bindings for Ruby☆11May 14, 2026Updated 3 weeks ago
- MACA: Marker-based automatic cell-type annotation for single cell expression data☆25Jul 12, 2023Updated 2 years ago
- ☆12Apr 24, 2020Updated 6 years ago
- R library to normalize cytometry data☆40Jan 16, 2026Updated 4 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Using self-organizing maps for visualization and interpretation of cytometry data☆35Apr 10, 2026Updated last month
- Network analyses of single cell-based digital twins for personalized treatment of inflammatory disease☆15Mar 23, 2024Updated 2 years ago
- Tutorials for multimodal omics data analysis☆20Feb 28, 2025Updated last year
- Python implementation of the Slingshot pseudotime algorithm☆77Oct 28, 2025Updated 7 months ago
- an integrative analysis tool for analysing large-scale single cell RNA-sequencing data☆37Aug 7, 2023Updated 2 years ago
- Single-cell analytic toolbox that offers modular workflows for multi-level cellular annotation and user-friendly analysis reports☆11Mar 31, 2026Updated 2 months ago
- The Cornell Single-Cell Muscle Project (scMuscle) aims to collect, analyze and provide to the research community skeletal muscle transcri…☆25Nov 30, 2022Updated 3 years ago
- ☆44May 11, 2026Updated 3 weeks ago
- Spatial Tumor Microenvironment (SpatialTME) database is a comprehensive database designed for characterize tumor spatial microenvironment…☆13Dec 4, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- SkewC a novel quality-assessment method to identify poor quality single-cells in scRNA-seq experiments. The method relies on the measure …☆10Aug 2, 2023Updated 2 years ago
- ODBC binding for Ruby☆20Jun 27, 2024Updated last year
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆32Dec 22, 2022Updated 3 years ago
- ☆10Jan 20, 2022Updated 4 years ago
- Metascape for Bioinformaticians (MSBio)☆13Jun 30, 2021Updated 4 years ago
- DBCLS RDFizing database guidelines☆16Aug 31, 2024Updated last year
- ☆12Sep 7, 2023Updated 2 years ago
- ☆32May 11, 2026Updated 3 weeks ago
- ☆14Feb 17, 2022Updated 4 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- A single-cell RNAseq differential expression analysis approach in case-control study☆10Mar 6, 2022Updated 4 years ago
- Metric learning-based graph-partitioned trajectory inference from single-cell data☆12Apr 28, 2023Updated 3 years ago
- Use batch balanced KNN (BBKNN) in R☆14Sep 9, 2025Updated 9 months ago
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆41Jan 6, 2021Updated 5 years ago
- Robust single cell clustering and comparison of population compositions across tissues and experimental models via similarity analysis.☆15Jul 16, 2023Updated 2 years ago
- Using TCR and expression for sequence embedding☆63Jan 6, 2026Updated 5 months ago
- Biology-centered data-driven quality control for scRNA-seq☆21May 22, 2023Updated 3 years ago