Lee-CBG / ATM-TCRLinks
☆11Updated last year
Alternatives and similar repositories for ATM-TCR
Users that are interested in ATM-TCR are comparing it to the libraries listed below
Sorting:
- 📝 [Paper] TCRen: predicting TCR-peptide recognition based on residue-level pairwise statistical potential☆22Updated 3 weeks ago
- ERGO-II, an updated version of ERGO including more features for TCR-peptide binding prediction☆34Updated 3 years ago
- Generic TCR-epitope recognition prediction using CNN approach on both known and novel epitopes☆17Updated 2 years ago
- Large language modeling applied to T-cell receptor (TCR) sequences.☆57Updated 3 years ago
- Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity☆74Updated 2 years ago
- Deep Learning the T Cell Receptor Binding Specificity of Neoantigen☆86Updated 3 years ago
- python tools for TCR:peptide-MHC modeling and analysis☆82Updated last year
- HLA-II ligand predictor.☆45Updated 2 years ago
- ☆38Updated 2 years ago
- A Deep Learning based Efficacy Prediction System for drug discovery☆72Updated 2 years ago
- Deep Learning Methods for Parsing T-Cell Receptor Sequencing (TCRSeq) Data☆120Updated last month
- ☆17Updated 4 years ago
- ☆80Updated 2 years ago
- STAPLER (Shared TCR And Peptide Language bidirectional Encoder Representations from transformers) is a language model that uses a joint T…☆28Updated 6 months ago
- BigMHC predicts MHC-I (neo)epitope presentation and immunogenicity☆56Updated last year
- A visible neural network model for drug response prediction☆148Updated 2 years ago
- NetTCR-2.0. Sequence-based prediction of peptide-TCR binding☆35Updated 3 years ago
- Code for "T Cell Receptor Specificity Prediction with Bimodal Attention Networks" (https://doi.org/10.1093/bioinformatics/btab294, ISMB 2…☆30Updated 3 months ago
- ☆20Updated 3 years ago
- ☆24Updated last year
- Scripts and datasets to reproduce the experiment of the paper "Exploring non-coding RNA functions with deep learning tools"☆16Updated 4 years ago
- Computational Optimization of DNA Activity (CODA)☆64Updated 6 months ago
- PRnet is a flexible and scalable perturbation-conditioned generative model predicting transcriptional responses to unseen complex perturb…☆62Updated 10 months ago
- ☆96Updated 4 months ago
- Functional Embedding of Gene Signatures☆46Updated last year
- ☆15Updated 4 years ago
- ☆48Updated 3 years ago
- Generalizable AI predicts immunotherapy outcomes across cancers and treatments☆40Updated last week
- ☆38Updated 5 months ago
- Predictor of TCR-epitope interactions☆34Updated last month