Lee-CBG / ATM-TCRLinks
β10Updated last year
Alternatives and similar repositories for ATM-TCR
Users that are interested in ATM-TCR are comparing it to the libraries listed below
Sorting:
- π [Paper] TCRen: predicting TCR-peptide recognition based on residue-level pairwise statistical potentialβ18Updated 4 months ago
- ERGO-II, an updated version of ERGO including more features for TCR-peptide binding predictionβ33Updated 3 years ago
- Large language modeling applied to T-cell receptor (TCR) sequences.β55Updated 3 years ago
- Generic TCR-epitope recognition prediction using CNN approach on both known and novel epitopesβ16Updated 2 years ago
- Deep Learning the T Cell Receptor Binding Specificity of Neoantigenβ83Updated 3 years ago
- python tools for TCR:peptide-MHC modeling and analysisβ80Updated last year
- β17Updated 4 years ago
- HLA-II ligand predictor.β44Updated 2 years ago
- Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunityβ72Updated 2 years ago
- NetTCR-2.0. Sequence-based prediction of peptide-TCR bindingβ35Updated 3 years ago
- PRnet is a flexible and scalable perturbation-conditioned generative model predicting transcriptional responses to unseen complex perturbβ¦β55Updated 7 months ago
- β35Updated 2 years ago
- Deep Learning Methods for Parsing T-Cell Receptor Sequencing (TCRSeq) Dataβ120Updated 2 months ago
- Scripts and datasets to reproduce the experiment of the paper "Exploring non-coding RNA functions with deep learning tools"β15Updated 4 years ago
- A visible neural network model for drug response predictionβ147Updated last year
- A Deep Learning based Efficacy Prediction System for drug discoveryβ69Updated 2 years ago
- STAPLER (Shared TCR And Peptide Language bidirectional Encoder Representations from transformers) is a language model that uses a joint Tβ¦β28Updated 3 months ago
- Predicting dynamic cellular protein-RNA interactions using deep learning and in vivo RNA structureβ65Updated last year
- Code for "T Cell Receptor Specificity Prediction with Bimodal Attention Networks" (https://doi.org/10.1093/bioinformatics/btab294, ISMB 2β¦β29Updated 3 weeks ago
- β9Updated 2 years ago
- Code for 5UTR projectβ25Updated 2 years ago
- β77Updated last year
- β20Updated 2 years ago
- β90Updated 9 months ago
- β49Updated last year
- ERGO is a deep learing based model for predicting TCR-peptide binding.β18Updated 4 years ago
- TCRGP, a novel Gaussian process method that can predict if TCRs recognize certain epitopes. This method can utilize different CDR sequencβ¦β30Updated 2 years ago
- Functional Embedding of Gene Signaturesβ46Updated last year
- Immunoglobulin and T-Cell receptor rearrangement softwareβ49Updated last year
- A visualization software for antibody multi sequence alignmentβ20Updated last year