Lee-CBG / ATM-TCRLinks
☆10Updated last year
Alternatives and similar repositories for ATM-TCR
Users that are interested in ATM-TCR are comparing it to the libraries listed below
Sorting:
- 📝 [Paper] TCRen: predicting TCR-peptide recognition based on residue-level pairwise statistical potential☆19Updated 2 weeks ago
- ERGO-II, an updated version of ERGO including more features for TCR-peptide binding prediction☆33Updated 3 years ago
- Generic TCR-epitope recognition prediction using CNN approach on both known and novel epitopes☆16Updated 2 years ago
- Large language modeling applied to T-cell receptor (TCR) sequences.☆56Updated 3 years ago
- ☆36Updated 2 years ago
- ☆17Updated 4 years ago
- NetTCR-2.0. Sequence-based prediction of peptide-TCR binding☆35Updated 3 years ago
- Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity☆72Updated 2 years ago
- python tools for TCR:peptide-MHC modeling and analysis☆81Updated last year
- A Deep Learning based Efficacy Prediction System for drug discovery☆70Updated 2 years ago
- ☆50Updated last year
- Deep Learning Methods for Parsing T-Cell Receptor Sequencing (TCRSeq) Data☆120Updated 2 months ago
- HLA-II ligand predictor.☆44Updated 2 years ago
- Deep Learning the T Cell Receptor Binding Specificity of Neoantigen☆84Updated 3 years ago
- PRnet is a flexible and scalable perturbation-conditioned generative model predicting transcriptional responses to unseen complex perturb…☆56Updated 8 months ago
- BigMHC predicts MHC-I (neo)epitope presentation and immunogenicity☆56Updated last year
- STAPLER (Shared TCR And Peptide Language bidirectional Encoder Representations from transformers) is a language model that uses a joint T…☆28Updated 4 months ago
- ☆47Updated 3 years ago
- Functional Embedding of Gene Signatures☆46Updated last year
- A visible neural network model for drug response prediction☆148Updated last year
- Code for "T Cell Receptor Specificity Prediction with Bimodal Attention Networks" (https://doi.org/10.1093/bioinformatics/btab294, ISMB 2…☆29Updated last month
- ☆77Updated last year
- ☆30Updated 3 months ago
- Predicting dynamic cellular protein-RNA interactions using deep learning and in vivo RNA structure☆65Updated last year
- ☆21Updated 2 years ago
- Scripts and datasets to reproduce the experiment of the paper "Exploring non-coding RNA functions with deep learning tools"☆15Updated 4 years ago
- ERGO is a deep learing based model for predicting TCR-peptide binding.☆18Updated 5 years ago
- ☆20Updated 2 years ago
- Code for 5UTR project☆25Updated 2 years ago
- Predicting immunogenic peptide recognized by TCR through ensemble deep learning☆16Updated last year