kojix2 / ruby-htslibLinks
HTSlib bindings for Ruby
☆11Updated last month
Alternatives and similar repositories for ruby-htslib
Users that are interested in ruby-htslib are comparing it to the libraries listed below
Sorting:
- Ruby UCSC API: An API for the UCSC Genome Database☆19Updated 3 years ago
- Powerful long read aligner for Ruby☆14Updated last month
- Porting of samtools-ruby to BioRuby. Binder of samtools for ruby, on the top of FFI -from original project-☆33Updated 6 years ago
- (No maintenance) Next Generation Sequencing Simulation with SNP, Variation and Sequencing Error Integrated☆24Updated 8 years ago
- Workshop: Using R/tidyverse to analyze & visualize gapminder/processed transcriptomics data!☆13Updated 2 weeks ago
- Benchmarking programming languages/implementations for common tasks in Bioinformatics☆184Updated 3 years ago
- A software to detect virome-wide integrations☆14Updated 4 years ago
- ☆13Updated 2 years ago
- 🔬 Genotyping tool for genome-edited samples using nanopore-targeted sequencing☆14Updated 3 weeks ago
- ☆16Updated last month
- SigProfilerSimulator allows realistic simulations of mutational patterns and mutational signatures in cancer genomes. The tool can be use…☆20Updated 4 months ago
- ☆12Updated 4 years ago
- Fast download BLAST databases from NCBI.☆35Updated last year
- SUSHI: Supporting User for SHell script Integration☆27Updated this week
- Analysis pipeline for the identification of viral integration events in genomes using a chimeric read approach.☆17Updated 3 months ago
- bioruby☆379Updated last week
- Simulation toolbox for structural variations.☆10Updated 6 years ago
- Rust wrapper of the BWA C API☆18Updated 4 months ago
- An extensible Ruby on Rails web-service application and database for visualising HTGS data☆18Updated 11 years ago
- Rails frontend to The Genome Institute's drug gene interaction database.☆95Updated last month
- GeneValidator: Identify problems with predicted genes☆47Updated last year
- ☆13Updated 2 months ago
- Core modules used by the GMS☆66Updated last year
- ☆18Updated 4 years ago
- The ECCsplorer is a bioinformatics pipeline for the automated detection of extrachromosomal circular DNA (eccDNA) from paired-end read da…☆20Updated last year
- Extract methylation calls from long reads (ONT/ PacBio)☆16Updated 3 weeks ago
- simple bioinformatics command-line (t)ools (i) (w)ished (i) (h)ad.☆44Updated 2 years ago
- Approach to identify simple and complex structural genomic rearrangements using a randomized approach☆21Updated 6 years ago
- Little code snippets that do (hopefully) useful things☆23Updated 2 years ago
- A tool to annotate human VCF files with PolyPhen2 effect measures☆10Updated 2 years ago