☆11Jan 20, 2022Updated 4 years ago
Alternatives and similar repositories for current-topics-bioinformatics-lecture
Users that are interested in current-topics-bioinformatics-lecture are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- a computational pipeline for the quantification of the Tumor Immune contexture from human RNA-seq data☆19Jun 16, 2021Updated 5 years ago
- Customer workshop materials☆19May 13, 2026Updated 4 months ago
- Nextflow pipeline for generation of phylogenetic trees to be visualized in Auspice.☆11Jan 6, 2026Updated 8 months ago
- A collection of Groovy classes that provide utility services to nextflow pipelines.☆13Oct 25, 2022Updated 3 years ago
- Spaghetti: in situ analysis of 16S rRNA amplicons obtained by nanopore sequencing☆20Jul 26, 2024Updated 2 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Luslab nextflow modules☆14Apr 30, 2021Updated 5 years ago
- A Nextflow pipeline to play Doom☆10Dec 1, 2025Updated 9 months ago
- Workflow for MAG quality assessment and taxonomical annotation.☆15May 26, 2026Updated 4 months ago
- ☆16Jun 30, 2021Updated 5 years ago
- Mycobacterium tuberculosis genomic analysis from Nanopore sequencing data☆15Jun 5, 2026Updated 3 months ago
- NeoFuse is a user-friendly pipeline for the prediction of fusion neoantigens from tumor RNA-seq data.☆22Jun 22, 2026Updated 3 months ago
- ☆19Dec 5, 2025Updated 9 months ago
- 2022학년도 2학기 오픈소스소프트웨어(OSS) 수업☆34Dec 17, 2022Updated 3 years ago
- Automatically source dotenv files into your Nextflow scope☆10Mar 27, 2026Updated 6 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- The Metagenomics-Toolkit is a scalable, data agnostic workflow that automates the analysis of short and long metagenomic reads obtained f…☆28Sep 13, 2026Updated 2 weeks ago
- Welcome to the StrainHub Repo - Files and Data - StrainHub Online:☆19Jun 26, 2022Updated 4 years ago
- A mapping-based pipeline for creating a phylogeny from bacterial whole genome sequences☆67Sep 1, 2026Updated 3 weeks ago
- GitSwift_update: A modern GUI tool for Git repository management. Streamlines documentation updates, changelog tracking, and GitHub issue…☆18Updated this week
- nextNEOpi: a comprehensive pipeline for computational neoantigen prediction☆96Jun 6, 2025Updated last year
- Real-time analysis pipeline for nanopore 16S rRNA data☆15Nov 29, 2022Updated 3 years ago
- MiCoP is a method for high-accuracy profiling of viral and fungal metagenomic communities.☆17Mar 31, 2022Updated 4 years ago
- Demultiplexing pipeline for sequencing data☆60Updated this week
- BACTpipe: An assembly and annotation pipeline for bacterial genomics☆21Aug 13, 2026Updated last month
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- A single-cell RNAseq differential expression analysis approach in case-control study☆10Mar 6, 2022Updated 4 years ago
- Use batch balanced KNN (BBKNN) in R☆14Sep 9, 2025Updated last year
- Plot genome alignment figure using progressiveMauve & genoPlotR☆22Aug 5, 2022Updated 4 years ago
- Ultrafast sequence typing and gene detection from NGS raw reads☆20Apr 15, 2021Updated 5 years ago
- nf-test utility functions☆13Sep 16, 2026Updated last week
- TADA - Targeted Amplicon Diversity Analysis - a DADA2-focused Nextflow workflow for any targeted amplicon region☆22Sep 9, 2026Updated 2 weeks ago
- A shiny app for metacell analysis☆11Updated this week
- Parallelised and automated construction of metagenomic classifier databases of different tools☆22Updated this week
- Nextflow language support for Visual Studio Editor☆38Sep 18, 2026Updated last week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- nf-tencentcloud is a nextflow plugin designed to add Tencent Cloud Object storage and Tencent Healthcare Omics Platform executor adaptati…☆17Updated this week
- Material do Curso PDI (Jupyter)☆12Dec 30, 2022Updated 3 years ago
- ☆12Mar 22, 2024Updated 2 years ago
- Pipeline for the Nanopore 16S and ITS long read clustering and taxonomy classification☆23Jun 12, 2026Updated 3 months ago
- A collection of unexpected challenges and learnings with nextflow and nf-core.☆42Oct 17, 2023Updated 2 years ago
- Nextflow pipeline encapsulating workflows for analyzing expansion lattice light-sheet microscopy (ExLLSM) imagery☆13Apr 15, 2026Updated 5 months ago
- Read contamination removal☆25Jan 24, 2024Updated 2 years ago