☆10Jan 20, 2022Updated 4 years ago
Alternatives and similar repositories for current-topics-bioinformatics-lecture
Users that are interested in current-topics-bioinformatics-lecture are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Customer workshop materials☆19May 13, 2026Updated 2 weeks ago
- A collection of Groovy classes that provide utility services to nextflow pipelines.☆13Oct 25, 2022Updated 3 years ago
- Spaghetti: in situ analysis of 16S rRNA amplicons obtained by nanopore sequencing☆20Jul 26, 2024Updated last year
- A Nextflow pipeline to play Doom☆10Dec 1, 2025Updated 5 months ago
- Luslab nextflow modules☆14Apr 30, 2021Updated 5 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- a computational pipeline for the quantification of the Tumor Immune contexture from human RNA-seq data☆19Jun 16, 2021Updated 4 years ago
- Mycobacterium tuberculosis genomic analysis from Nanopore sequencing data☆14Jun 12, 2024Updated last year
- NeoFuse is a user-friendly pipeline for the prediction of fusion neoantigens from tumor RNA-seq data.☆21Aug 9, 2022Updated 3 years ago
- Automatically source dotenv files into your Nextflow scope☆10Mar 27, 2026Updated 2 months ago
- Welcome to the StrainHub Repo - Files and Data - StrainHub Online:☆18Jun 26, 2022Updated 3 years ago
- ☆15Apr 2, 2025Updated last year
- nextNEOpi: a comprehensive pipeline for computational neoantigen prediction☆91Jun 6, 2025Updated 11 months ago
- ☆14Jun 30, 2021Updated 4 years ago
- GitSwift_update: A modern GUI tool for Git repository management. Streamlines documentation updates, changelog tracking, and GitHub issue…☆19Dec 28, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A proof of concept daisy-chaining Nextflow workflows☆31Mar 10, 2026Updated 2 months ago
- A mapping-based pipeline for creating a phylogeny from bacterial whole genome sequences☆66Apr 30, 2026Updated 3 weeks ago
- MiCoP is a method for high-accuracy profiling of viral and fungal metagenomic communities.☆16Mar 31, 2022Updated 4 years ago
- Demultiplexing pipeline for sequencing data☆54May 11, 2026Updated 2 weeks ago
- BACTpipe: An assembly and annotation pipeline for bacterial genomics☆20Dec 3, 2024Updated last year
- Plot genome alignment figure using progressiveMauve & genoPlotR☆22Aug 5, 2022Updated 3 years ago
- A single-cell RNAseq differential expression analysis approach in case-control study☆10Mar 6, 2022Updated 4 years ago
- Real-time analysis pipeline for nanopore 16S rRNA data☆15Nov 29, 2022Updated 3 years ago
- nf-test utility functions☆12May 22, 2026Updated last week
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Ultrafast sequence typing and gene detection from NGS raw reads☆20Apr 15, 2021Updated 5 years ago
- Use batch balanced KNN (BBKNN) in R☆14Sep 9, 2025Updated 8 months ago
- Nextflow language support for Visual Studio Editor☆37Updated this week
- The Metagenomics-Toolkit is a scalable, data agnostic workflow that automates the analysis of short and long metagenomic reads obtained f…☆25May 21, 2026Updated last week
- A shiny app for metacell analysis☆10May 15, 2026Updated 2 weeks ago
- A pipeline for the identification of fungi in public metagenomics datasets☆18Nov 23, 2020Updated 5 years ago
- Bioinformatics algorithms: Needleman-Wunsch, Feng-Doolittle, Gotoh and Nussinov implemented in Python☆18Dec 14, 2016Updated 9 years ago
- TADA - Targeted Amplicon Diversity Analysis - a DADA2-focused Nextflow workflow for any targeted amplicon region☆22May 9, 2026Updated 2 weeks ago
- A pipeline to investigate horizontal gene transfer from NGS data☆27Apr 30, 2026Updated 3 weeks ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆10Jul 23, 2020Updated 5 years ago
- A collection of unexpected challenges and learnings with nextflow and nf-core.☆42Oct 17, 2023Updated 2 years ago
- Scripts used for the Differential NicheNet analyses in the Liver Atlas paper Guilliams et al., Cell 2022☆10Jan 12, 2022Updated 4 years ago
- Simple bacterial assembly and annotation pipeline☆88May 11, 2026Updated 2 weeks ago
- Code to go along with a manuscript: Bunis, et. al., Cell Reports, 2021.☆12May 3, 2023Updated 3 years ago
- nf-tencentcloud is a nextflow plugin designed to add Tencent Cloud Object storage and Tencent Healthcare Omics Platform executor adaptati…☆18Jul 7, 2025Updated 10 months ago
- Read contamination removal☆25Jan 24, 2024Updated 2 years ago