collected resource for scRNA-seq analysis
☆67Jul 19, 2023Updated 3 years ago
Alternatives and similar repositories for scrna-recom
Users that are interested in scrna-recom are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- bioinformatics R test code☆14May 29, 2026Updated 2 months ago
- Pretty, simple, optionally interactive plots for bioinformatics analysis pipelines☆14Mar 1, 2023Updated 3 years ago
- An end-to-end Single-Cell Pipeline designed to facilitate comprehensive analysis and exploration of single-cell data.☆672Mar 11, 2026Updated 5 months ago
- ☆10Apr 10, 2016Updated 10 years ago
- Calibrated clustering with artificial variables to avoid over-clustering in single-cell RNA-sequencing☆21Nov 18, 2025Updated 9 months ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- ☆13Mar 17, 2019Updated 7 years ago
- Create stacked violin plot☆51Mar 2, 2022Updated 4 years ago
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020☆33Sep 16, 2021Updated 4 years ago
- ☆34Jan 26, 2022Updated 4 years ago
- Deep Transfer Learning of Drug Sensitivity by Integrating Bulk and Single-cell RNA-seq data☆63Jul 22, 2024Updated 2 years ago
- Functions to analyze copy number aberrations in single-cell data☆13Feb 3, 2025Updated last year
- Code to go along with https://doi.org/10.1016/j.cell.2022.09.010☆21Mar 16, 2022Updated 4 years ago
- ☆10Sep 26, 2019Updated 6 years ago
- ☆311Nov 10, 2024Updated last year
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Functional Annotation for Single-Cell Transcriptomics☆12Jun 29, 2024Updated 2 years ago
- CORNAS is a fast method for reliable DEG calls in unreplicated conditions.☆13Jul 14, 2019Updated 7 years ago
- ☆15Apr 11, 2024Updated 2 years ago
- ☆12Dec 4, 2023Updated 2 years ago
- ☆14Mar 2, 2020Updated 6 years ago
- Code repository site for manuscript: Unraveling the Heterogeneity of Tumor-Infiltrating Myeloid Cells in Immune Checkpoint Blockade: A Si…☆13Jun 24, 2023Updated 3 years ago
- Deposited codes for snMultiome in human cortex manuscript☆14Aug 12, 2024Updated 2 years ago
- RA Synovial Single-cell Multimodal Cell Atlas☆22Mar 6, 2024Updated 2 years ago
- Estimation of Single-Cell Potency with Single Cell Entropy☆46Apr 12, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Validating glioblastoma immune cell immunohistochemsitry using computational deconvolution of TCGA tumors☆14Jul 10, 2019Updated 7 years ago
- Multi-Omics integration and VIsualization in Cancer Subtyping☆149Jul 19, 2021Updated 5 years ago
- R script for the covid balf data analysis☆66Aug 12, 2020Updated 6 years ago
- ☆27Jun 5, 2025Updated last year
- CellRank 2's reproducibility repository.☆16Sep 4, 2024Updated last year
- Example of run CytoSig and reproduce prediction results on bulk and single-cell cohorts☆16Jul 5, 2023Updated 3 years ago
- Repository for all R scripts used for the bioinformatic analyses of the mouse and human 10x Genomics Visium spatially resolved transcript…☆34Jul 13, 2024Updated 2 years ago
- Systematic analyses of intronic polyadenylation from standard RNAseq data☆18Sep 10, 2024Updated last year
- My youtube programming scripts☆60Jan 16, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆13Dec 16, 2021Updated 4 years ago
- An R package to calculate Dynamical Network Biomarkers (DNB).☆11Sep 16, 2022Updated 3 years ago
- ☆17May 21, 2024Updated 2 years ago
- ☆30Apr 5, 2025Updated last year
- Pipeline that runs two-sample Mendelian randomization on molecular QTLs and GWAS loci and tests for horizontal pleiotropy.☆26Nov 18, 2023Updated 2 years ago
- Snakemake workflow for somatic mutation detection without matched normal samples☆14Mar 4, 2023Updated 3 years ago
- ☆33Dec 2, 2021Updated 4 years ago