Deep learning model for single-cell inference of multi-omic profiles from a single input modality.
☆50Jul 17, 2023Updated 3 years ago
Alternatives and similar repositories for babel
Users that are interested in babel are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆36Apr 15, 2025Updated last year
- VEGA: VAE Enhanced by Gene Annotations☆18May 5, 2022Updated 4 years ago
- ☆18Jul 31, 2021Updated 4 years ago
- Deep joint-leaning single-cell multi-omics model☆16Jun 27, 2022Updated 4 years ago
- ☆10Jun 5, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Imputing Single-cell RNA-seq data by combining Graph Convolution and Autoencoder Neural Networks☆20Jun 21, 2024Updated 2 years ago
- A Python package for jointly analyzing multimodal single-cell sequencing data☆26Jan 17, 2025Updated last year
- Sequence-based Modeling of single-cell ATAC-seq using Convolutional Neural Networks.☆102Sep 9, 2025Updated 10 months ago
- ☆28Dec 15, 2021Updated 4 years ago
- ☆19Dec 1, 2021Updated 4 years ago
- Generative adversarial networks for single-cell RNA-seq imputation☆39Jul 20, 2020Updated 6 years ago
- The main repository for ACTIVA: realistic single-cell RNA-seq generation with automatic cell-type identification using introspective vari…☆10Jan 23, 2023Updated 3 years ago
- ☆17Jun 6, 2022Updated 4 years ago
- ☆11Sep 22, 2021Updated 4 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Single cell perturbation prediction☆353Dec 5, 2024Updated last year
- Joint variational Autoencoders for Multimodal Imputation and Embedding (JAMIE)☆32Sep 11, 2025Updated 10 months ago
- nimfa - A Python Library for Nonnegative Matrix Factorization Techniques☆10Aug 30, 2018Updated 7 years ago
- Multigrate: multiomic data integration for single-cell genomics☆34Updated this week
- A versatile single-cell cross-modality translation method via dual-aligned variational autoencoders☆28Jul 1, 2024Updated 2 years ago
- The software of Pamona, a partial manifold alignment algorithm.☆23Mar 21, 2021Updated 5 years ago
- iS-CellR: interactive graphical tool for analysis of single-cell RNAseq data☆24Oct 9, 2019Updated 6 years ago
- ☆11Jun 13, 2024Updated 2 years ago
- Multi-omics data analysis for rare population inference using single-cell graph transformer☆23Nov 5, 2025Updated 8 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- ☆18Jul 30, 2022Updated 3 years ago
- CellDrift: temporal perturbation effects for single cell data☆13Dec 3, 2022Updated 3 years ago
- Graph-linked unified embedding for single-cell multi-omics data integration☆472Feb 9, 2026Updated 5 months ago
- ☆67Sep 13, 2024Updated last year
- "Topological Identification and Interpretation for Single-cell Gene Regulation Elucidation across Multiple Platforms using scMGCA" in Nat…☆19Feb 5, 2023Updated 3 years ago
- TF Binding and Expression Target Analysis 2☆21Nov 19, 2025Updated 8 months ago
- An eXplainable Cell-specific machine learning method to predict clinical Phenotypes using single-cell multi-omics☆15Sep 23, 2025Updated 9 months ago
- Identifying transcription factor binding sites from neural network contribution scores☆23Nov 8, 2025Updated 8 months ago
- ☆12Oct 4, 2021Updated 4 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Weakly supervised learning uncovers phenotypic signatures in single-cell data☆41Jun 7, 2026Updated last month
- ☆15Jan 13, 2021Updated 5 years ago
- The Software of UnionCom Algorithm☆26Jul 29, 2024Updated last year
- MGcount github repository☆14Jan 19, 2023Updated 3 years ago
- Code for reproducing results from the paper "RNA velocity and protein acceleration from single-cell multiomics experiments."☆11Feb 1, 2020Updated 6 years ago
- scGRO-seq analyses codes☆13Jan 9, 2024Updated 2 years ago
- Superpixel for CIFAR dataset☆12Sep 9, 2022Updated 3 years ago