Alternatives and similar repositories for ClassPro:

Users that are interested in ClassPro are comparing it to the libraries listed below

• davidebolo1993 / cosigt
  ☆14Updated this week
• rlorigro / simple-dotplot
  Very simple and configurable all-in-one dotplot program
  ☆12Updated last year
• KolmogorovLab / hapdiff
  SV calling for diploid assemblies
  ☆23Updated 10 months ago
• dfguan / pin_hic
  A Hi-C scaffolding method
  ☆22Updated 3 years ago
• esolares / HapSolo
  Reduction of Althaps and Duplicate Contigs for Improved Hi-C Scaffolding
  ☆19Updated 5 months ago
• Wenfei-Xian / TIPP
  Telomere local assembly, Improved whole genome polish, and Plastid assembly
  ☆16Updated 2 weeks ago
• simonhmartin / asynt
  Genome alignment and synteny plots
  ☆27Updated last year
• pangenome / vcfbub
  use variant nesting information to flter overlapping sites from vg deconstruct output
  ☆26Updated 7 months ago
• jydu / maffilter
  The MafFilter genome alignment processor
  ☆17Updated 4 months ago
• mrvollger / NucFreq
  ☆35Updated 10 months ago
• dfguan / asset
  assembly evaluation tool
  ☆34Updated 2 years ago
• kavonrtep / dante
  Domain based annotation of transposable elements
  ☆19Updated this week
• mkirsche / Iris
  A module for improving the insertion sequences of structural variant calls
  ☆30Updated 3 years ago
• mikolmogorov / maf2synteny
  A tool for recovering synteny blocks from multiple alignment
  ☆29Updated 3 years ago
• thegenemyers / MERQURY.FK
  FastK based version of Merqury
  ☆22Updated last month
• compbiol / CAMSA
  CAMSA: a tool for Comparative Analysis and Merging of Scaffold Assemblies
  ☆24Updated 4 years ago
• magspho / hifieval
  a tool to evaluate long-read error correction mainly with PacBio High-Fidelity Reads (HiFi reads).
  ☆21Updated last year
• moold / paf2dotplot
  Draw a dot plot from a paf alignment
  ☆25Updated last month
• at-cg / RAFT
  ☆21Updated 5 months ago
• tbenavi1 / KMC
  Fast and frugal disk based k-mer counter
  ☆13Updated 3 years ago
• A-J-F-Mackintosh / syngraph
  Toolkit for evolutionary analyses of linkage groups
  ☆26Updated 6 months ago
• c-zhou / polyGembler
  ☆15Updated 2 years ago
• vpc-ccg / sedef
  Identification of segmental duplications in the genome
  ☆26Updated 2 years ago
• ndierckx / combiSV
  Combine structural variation outputs from long sequencing reads into a superior call set
  ☆13Updated 7 months ago
• ekg / gimbricate
  recompute GFA link overlaps
  ☆25Updated 2 years ago
• yangli557 / AnnoSINE
  SINE annotation tool for plant genomes
  ☆17Updated last year
• Uauy-Lab / pangenome-haplotypes
  Scripts to do haplotype analysis on pan genomes.
  ☆21Updated 4 years ago
• AntoineHo / HapPy
  Haploidy and Size Completeness Estimation
  ☆13Updated 9 months ago
• pdishuck / GAVISUNK
  Genome Assembly Validation via Inter-SUNK distances in ONT reads
  ☆11Updated last year