LHentges / LanceOtron
☆23Updated 3 months ago
Related projects ⓘ
Alternatives and complementary repositories for LanceOtron
- IDR☆30Updated last year
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆36Updated 2 years ago
- SingleCell Nanopore sequencing data analysis☆52Updated last month
- Flexible and efficient parsing, interpreting and editing of sequencing reads☆41Updated last month
- ☆33Updated last year
- Long-read Isoform Quantification and Analysis☆39Updated 3 months ago
- 4C-seq processing pipeline☆22Updated 7 months ago
- GFF3sort: A Perl Script to sort gff3 files and produce suitable results for tabix tools☆47Updated 4 years ago
- ☆23Updated 3 years ago
- A Library to Explore Chromatin Interaction Patterns for Topologically Associating Domains☆40Updated 2 years ago
- Pipeline to identify isoforms from full-length cDNA sequencing data☆22Updated 6 months ago
- Splice junction analysis and filtering from BAM files☆39Updated 2 years ago
- ☆35Updated 5 years ago
- RNA-seq workflow: differential transcript usage☆20Updated last year
- For biological deep sequencing data. Decompose a UCSC knownGenes/Ensembl GTF file into transcript regions (i.e. exons, introns, UTRs and…☆33Updated last year
- Software to compute reproducibility and quality scores for Hi-C data☆44Updated 5 years ago
- Tutorial Website☆53Updated 3 years ago
- ENCODE long read RNA-seq pipeline☆44Updated last year
- ☆33Updated last year
- Modify existing reference fasta and gff3/gtf files to include a new sequence☆30Updated this week
- Find and characterise transposable element insertions☆21Updated last year
- Genomic Association Tester☆29Updated last year
- An R package for estimating poly(A)-tail lengths in Oxford Nanopore RNA and DNA reads.☆53Updated last month
- Snakemake-based workflow for detecting structural variants in genomic data☆77Updated 9 months ago
- code associated with crane-nature-2015, 10.1038/nature14450☆34Updated 9 years ago
- Interactive multiscale visualization for structural variation in human genomes☆66Updated this week