woojunshim / TRIAGELinks
Transcriptional Regulatory Inference Analysis from Gene Expression (TRIAGE)
☆9Updated last year
Alternatives and similar repositories for TRIAGE
Users that are interested in TRIAGE are comparing it to the libraries listed below
Sorting:
- ☆12Updated 3 months ago
- R package for transfer learning of single-cell RNA-seq denoising☆30Updated 3 years ago
- ☆11Updated 2 years ago
- twosigma☆8Updated 2 years ago
- R package for gene selection using k-NN graphs.☆13Updated 2 years ago
- Gene Expression Decomposition and Integration☆18Updated 4 months ago
- BioTIP: Biological Tipping-Point Identification and Characterization☆20Updated 3 weeks ago
- MarcoPolo is a clustering-free approach to the exploration of bimodally expressed genes along with group information in single-cell RNA-s…☆20Updated 8 months ago
- corto (Correlation Tool): an R package to generate correlation-based DPI networks☆20Updated 2 years ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆43Updated last month
- Mosaic single cell data integration using non-overlapping features☆37Updated 2 years ago
- A clusterability measure for scRNA-seq data.☆18Updated 3 years ago
- Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data☆21Updated last year
- MOJITOO: a fast and universal method for integration of multimodal single cell data☆10Updated 8 months ago
- RNA velocity validation☆22Updated 3 years ago
- Analysis methods for analysing single cell RNA-seq data; particularly with the goal of checking if tentative clusters of cells are signif…☆38Updated last year
- Single cell STEM (scSTEM) is a shiny app based R package for visualizing and clustering genes in pseudotime ordered single cell RNA-seq d…☆18Updated 3 years ago
- Methods for clustering and analyzing high-throughput single cell immune cell repertoires (RepSeq)☆15Updated 2 weeks ago
- Batch Effect Correction of RNA-seq Data through Sample Distance Matrix Adjustment☆18Updated 4 years ago
- CiteFuse:☆28Updated 2 years ago
- Fast motif matching in R☆47Updated last year
- Analytical tools and pipelines for bulk and single cell epigenomic and human genetic data☆27Updated 4 years ago
- benchmark for single-cell RNA-seq imputation methods☆26Updated last year
- Marker gene selection from scRNA-seq data☆15Updated 4 years ago
- Landscape Single Cell Entropy☆20Updated 4 years ago
- This repository contains HCA Benchmarking codes☆26Updated 5 years ago
- Single-cell Case Control Analysis☆50Updated 8 months ago
- scover☆23Updated last year
- Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles☆29Updated 5 years ago
- Workflow for the Association of T-cell receptors from 3' single-cell RNA-seq (WAT3R)☆21Updated 2 years ago