matthewwolak / nadiv
R package that constructs (non)additive genetic relationship matrices, and their inverses, from a pedigree to be used in linear mixed effect models (A.K.A. the 'animal model').
☆23Updated 8 months ago
Alternatives and similar repositories for nadiv:
Users that are interested in nadiv are comparing it to the libraries listed below
- ☆47Updated 2 weeks ago
- Parallel Genomic evaluations in R☆17Updated 7 months ago
- This is a read-only mirror of the CRAN R package repository. sommer — Solving Mixed Model Equations in R. Homepage: https://github.com/…☆16Updated last month
- Mixed models @lme4 + custom covariances + parameter constraints☆53Updated 4 years ago
- Package for multi-environment trial analysis☆34Updated 6 months ago
- Statistical methods for forest genetic resources analysts☆35Updated 9 months ago
- A tutorial of the BLUPF90 family programs☆22Updated last week
- See https://biometris.github.io/statgenGWAS for a full description☆14Updated last month
- An R package to compute relationship matrices for diploid and autopolyploid species☆11Updated 6 months ago
- asremlPlus is an R package that augments the use of 'ASReml-R' and 'ASReml4-R' in fitting mixed models☆18Updated last month
- See https://biometris.github.io/statgenGxE for a full description☆10Updated last month
- lme4 for Genomic Selection☆17Updated 4 years ago
- Statistical GENetics Input/Output Functions☆18Updated 2 months ago
- 🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction☆70Updated 11 months ago
- Genotype Calling with Uncertainty from Sequencing Data in Polyploids 🍌🍓🥔🍠🥝☆30Updated 2 months ago
- Process MS results in R, in a tidy way☆17Updated 6 years ago
- An R package to compute relationship matrices for diploid and autotetraploid species☆18Updated last year
- R functions related to pedigrees☆11Updated 10 months ago
- QTL analysis in diallel populations☆12Updated last year
- Multivariate Gaussian Models for Genomic and Pedigree Data☆12Updated 4 years ago
- Added functions for Echidna in R☆11Updated 2 years ago
- Heritability in plant breeding - R and SAS code examples☆33Updated 4 years ago
- Using genome-wide markers for polyploid breeding☆11Updated 4 months ago
- Effective Computing—Resources for Computational Biologists☆26Updated 5 years ago
- ☆24Updated last year
- An R package to analyse and visualise admixture proportions from STRUCTURE, fastSTRUCTURE, TESS, ADMIXTURE etc.☆149Updated last year
- efficient sampling for close-kin mark recapture power estimation☆14Updated this week
- R package to estimate kinship and FST from SNP data☆21Updated 7 months ago
- ☆108Updated 2 weeks ago
- Simulation of Pleiotropic, Linked and Epistatic Phenotypes☆13Updated last year