Linear mixed models on ARGs
☆18Jan 16, 2026Updated 7 months ago
Alternatives and similar repositories for tslmm
Users that are interested in tslmm are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Sampling and inference of genealogies with recombination☆61Aug 21, 2026Updated last week
- Population-scale Ancestral Recombination Graph (ARG) library☆190Updated this week
- Genotype Representation Graph Library☆50Updated this week
- bcftools-compatible querying and format conversion for VCF Zarr☆28Jun 8, 2026Updated 2 months ago
- ☆13Jul 8, 2026Updated last month
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- VCF Zarr Specification☆18Jun 4, 2026Updated 2 months ago
- Automatically exported from code.google.com/p/macs☆17Oct 17, 2019Updated 6 years ago
- Phasing and genotype Imputation comparison. Have been evaluated: BEAGLE 5.4, EAGLE 2.4.1, SHAPEIT 4, MINIMAC 4, IMPUTE 5, using accuracy …☆23Feb 29, 2024Updated 2 years ago
- Code used to process and analyze structural variants and short tandem repeat variants profiled in 719 deeply sequenced whole genomes as p…☆11Jun 25, 2019Updated 7 years ago
- R package for breeding program simulations☆71Jul 24, 2026Updated last month
- ☆17Mar 21, 2023Updated 3 years ago
- Make interactive LocusZoom plots from a local GWAS file☆10May 9, 2025Updated last year
- Rust implmentation of VCF parser☆27Oct 2, 2022Updated 3 years ago
- The fastest VCF/BCF parser in R https://doi.org/10.1093/bioinformatics/btae049☆20Aug 10, 2026Updated 2 weeks ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Algorithm for rapid, phase-free detection of long identical by descent segments☆24Mar 13, 2026Updated 5 months ago
- ☆11Oct 23, 2019Updated 6 years ago
- A binary serialization format for sparse, labeled 2D numeric datasets☆12Sep 29, 2015Updated 10 years ago
- Automated Machine Learning for Environmental Data-Driven Genome Prediction☆16Sep 12, 2025Updated 11 months ago
- Implemention of Accurate estimation of SNP-heritability from biobank-scale data irrespective of genetic architecture. (Nature Genetics 20…☆15Sep 5, 2019Updated 6 years ago
- Based on their genomic data types and goals, this course will help learners find educational resources and tools to help them process and…☆18Aug 1, 2026Updated 3 weeks ago
- Code and Tutorials for Running the MArginal ePIstasis Test (MAPIT)☆20Nov 29, 2022Updated 3 years ago
- ☆13Oct 15, 2024Updated last year
- Code associated with the manuscript "A complete reference genome improves analysis of human genetic variation".☆17Jan 17, 2023Updated 3 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- MPH is a C++ program for fast REML estimation of genetic (co)variance components.☆15Jan 5, 2026Updated 7 months ago
- Extra add-ons that may be useful for people using SLiM, but that are not part of the SLiM project itself☆45Oct 30, 2025Updated 10 months ago
- SLiM is a genetically explicit forward simulation software package for population genetics and evolutionary biology. It is highly flexib…☆228Updated this week
- An R package to run stochastic simulations of breeding scheme genetics☆10Nov 20, 2025Updated 9 months ago
- A graph-based pipeline used to call/genotype snvs/indels/SVs from NGS data☆17Aug 30, 2025Updated last year
- A high-performance, ALL-in-ONE suite for quantitative genetics that unifies genome-wide association studies (GWAS) and genomic selection …☆36Aug 20, 2026Updated last week
- Rust implementation of the wavefront alignment algorithm☆14Jul 4, 2022Updated 4 years ago
- CoMorMent-Containers☆39Jun 8, 2026Updated 2 months ago
- Approximate Bayesian Computation (ABC) algorithms for likelihood free inference in julia☆56Jul 9, 2025Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Modeling and Analysis of (Statistical) Genetics data in python☆20Aug 9, 2026Updated 3 weeks ago
- Pedigree simulator☆33Aug 1, 2026Updated 3 weeks ago
- A Python package for landscape genomic simulation☆13Dec 15, 2025Updated 8 months ago
- A web app using Vision Transformers for quick and accurate diagnosis of plant diseases, aiding effective treatment and plant health.☆13Aug 5, 2026Updated 3 weeks ago
- TELOmere SEARCH in Long sequencing Reads☆14Dec 26, 2025Updated 8 months ago
- Python package for detecting positive selective sweeps using time-series genomics sampling data.☆21Apr 9, 2024Updated 2 years ago
- Text objects and motions for Latex editing in Vim.☆14Sep 28, 2020Updated 5 years ago