wenwenmin / STMGACView external linksLinks
Masked Graph Autoencoders with Contrastive Augmentation for Spatially Resolved Transcriptomics Data
☆18Aug 7, 2024Updated last year
Alternatives and similar repositories for STMGAC
Users that are interested in STMGAC are comparing it to the libraries listed below
Sorting:
- Pretrained-Guided Masked Conditional Diffusion Models for Microbiome Data Analysis☆14Aug 7, 2024Updated last year
- We propose STG3Net, a novel method designed to integrate multiple SRT datasets and correct batch effects.☆14Aug 8, 2024Updated last year
- Masked adversarial neural network for cell type deconvolution (MACD) in spatial transcriptomics data☆14Jun 16, 2025Updated 7 months ago
- scASDC is an attention enhanced structural deep clustering method for scRNA-seq cell clustering☆17Aug 8, 2024Updated last year
- Deep Clustering Representation for Spatially Resolved Transcriptomics Data via Multi-view Variational Graph Auto-Encoders with Consensus …☆15Jun 24, 2025Updated 7 months ago
- ☆16May 27, 2024Updated last year
- High-Resolution Spatial Transcriptomics Using Histology Images with HisToSGE (Pathology Image Large Model, Transformers)☆20Jul 24, 2024Updated last year
- SpaDiT: Diffusion Transformer for Spatial Gene Expression Prediction using scRNA-seq☆25Dec 12, 2025Updated 2 months ago
- mclSTExp: Multimodal Contrastive Learning for Spatial Gene Expression Prediction Using Histology Images☆40Jan 10, 2025Updated last year
- A self-supervised learning method with Vision Transformer as backbone network for resolution enhancement in spatial transcriptomics.☆10Aug 25, 2025Updated 5 months ago
- [PLoS Computational Biology 2025] Domain-Adversarial Masked Autoencoder (SpaDAMA) for cell type deconvolution in spatial transcriptomics …☆11Nov 6, 2025Updated 3 months ago
- [Advanced Science 2025] SpaBatch: Deep learning-based cross-slice integration and 3D spatial domain identification in spatial transcripto…☆18Nov 27, 2025Updated 2 months ago
- We propose SpatialCVGAE, which uses multiple variational graph autoencoders with different initializations to simultaneously generate cor…☆13Jun 24, 2025Updated 7 months ago
- Multi-slice Spatial Transcriptome Domain Analysis.☆13Dec 13, 2024Updated last year
- Multi-Layer Network Model leverages identification of spatial domains from spatial transcriptomics data☆12Aug 25, 2024Updated last year
- Code for the spatialLIBD R/Bioconductor package and shiny app☆109Jan 15, 2026Updated 3 weeks ago
- Jupyter notebooks for analysis and figures related to the native organelle IP paper☆13Nov 13, 2025Updated 3 months ago
- EDF solves the multi-view features fusion problem by searching an optimal combination scheme of different basic fusion operators.☆10Jan 23, 2022Updated 4 years ago
- STAligner is a tool for alignment and integration of spatially resolved transcriptomics data.☆50Apr 8, 2024Updated last year
- Repo for our work "Systematic Evaluation of Large Vision-Language Models for Surgical Artificial Intelligence"☆19Jun 2, 2025Updated 8 months ago
- analyses of scRNAseq and spatial transcriptomics dataset of developing human pancreas at multiple gestational stages☆10Jan 30, 2023Updated 3 years ago
- 机器学习(Machine Learning)、深度学习(Deep Learning)、对抗神经网络(GAN),图神经网络(GNN),NLP,大数据相关的发展路书(roadmap), 并附海量源码(python,pytorch)带大家消化基本知识点,突破面试,完成从新手到合格…☆10Feb 25, 2020Updated 5 years ago
- Tumor type classifier using cancer genomic panel sequencing data☆12Mar 12, 2024Updated last year
- ☆10May 31, 2023Updated 2 years ago
- ☆14Jan 25, 2023Updated 3 years ago
- Cell-type Assignment and Module Extraction based on a heterogeneous graph neural network.☆10Oct 30, 2023Updated 2 years ago
- ☆15Jan 28, 2026Updated 2 weeks ago
- ☆13Jan 23, 2025Updated last year
- Codebase for the paper HawkI: HawkI: Homography & Mutual Information Guidance for 3D-free Single Image to Aerial View☆13Jun 5, 2024Updated last year
- ☆11Apr 10, 2023Updated 2 years ago
- ☆15Feb 20, 2025Updated 11 months ago
- ☆14May 30, 2024Updated last year
- ☆11Jun 13, 2024Updated last year
- an efficient data integration method for multiple spatial transcriptomics data with non- cluster-relevant effects such as the complex batc…☆12Dec 15, 2025Updated last month
- A fast and robust Bayesian nonparametric method for prediction of complex traits using GWAS summary statistics☆13May 24, 2025Updated 8 months ago
- Subpixel phase correlation for image registration, adapted for Pytorch API with GPU support☆14Nov 4, 2020Updated 5 years ago
- ☆11Oct 4, 2021Updated 4 years ago
- ☆58Oct 10, 2025Updated 4 months ago
- ☆14Aug 14, 2023Updated 2 years ago