fdu-wangfeilab / stDiffLinks
A novel method named stDiff investigates the potential of employing diffusion models for single-cell omics generation.
☆22Updated last year
Alternatives and similar repositories for stDiff
Users that are interested in stDiff are comparing it to the libraries listed below
Sorting:
- Identify spatial domain☆79Updated 2 months ago
- An offical repo for paper "Single-cells are Spatial Tokens: Transformers for Spatially Resolved Transcriptomics Data Imputation"☆18Updated 2 years ago
- ☆39Updated last year
- ☆14Updated 2 years ago
- conST: an interpretable multi-modal contrastive learning framework for spatial transcriptomics☆28Updated last year
- Her2 Breast Cancer Project☆84Updated 2 years ago
- A unified approach for integrating spatial and single-cell transcriptomics data by leveraging deep generative models☆69Updated last year
- ☆41Updated last year
- ☆20Updated 4 months ago
- ☆127Updated last year
- Repository for Nicheformer: a foundation model for single-cell and spatial omics☆95Updated 5 months ago
- domain adaptation of spatial and single-cell transcriptome☆27Updated 11 months ago
- ☆60Updated 9 months ago
- Enhancing spatial transcriptomics data by predicting the expression of unmeasured genes from a dissociated scRNA-seq data☆36Updated last year
- ☆140Updated 8 months ago
- ☆59Updated last year
- ☆122Updated 3 years ago
- a unified single-cell data integration framework by optimal transport☆35Updated 10 months ago
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics☆73Updated 3 years ago
- Super-resolved spatial transcriptomics by deep data fusion☆74Updated 2 years ago
- SpaGCN: Integrating gene expression, spatial location and histology to identify spatial domains and spatially variable genes by graph con…☆232Updated last year
- STAligner is a tool for alignment and integration of spatially resolved transcriptomics data.☆44Updated last year
- SpatialGlue is a novel deep learning methods for spatial multi-omics data integration.☆66Updated last year
- ☆14Updated last month
- STAligner: Integrating spatial transcriptomics data across different conditions, technologies, and developmental stages☆23Updated last year
- Spatially Resolved Gene Expression Prediction from H&E Histology Images via Bi-modal Contrastive Learning☆81Updated 10 months ago
- ☆13Updated last year
- ☆27Updated 7 months ago
- Deciphering tumor ecosystems at super-resolution from spatial transcriptomics with TESLA☆58Updated last year
- Masked Graph Autoencoders with Contrastive Augmentation for Spatially Resolved Transcriptomics Data☆17Updated last year