fdu-wangfeilab / stDiffLinks
A novel method named stDiff investigates the potential of employing diffusion models for single-cell omics generation.
☆24Updated last year
Alternatives and similar repositories for stDiff
Users that are interested in stDiff are comparing it to the libraries listed below
Sorting:
- Identify spatial domain☆86Updated 6 months ago
- ☆41Updated 2 years ago
- Her2 Breast Cancer Project☆87Updated 3 years ago
- An offical repo for paper "Single-cells are Spatial Tokens: Transformers for Spatially Resolved Transcriptomics Data Imputation"☆18Updated 2 years ago
- ☆42Updated last year
- ☆23Updated 8 months ago
- conST: an interpretable multi-modal contrastive learning framework for spatial transcriptomics☆29Updated last year
- ☆64Updated last year
- ☆15Updated 2 years ago
- ☆139Updated last year
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics☆77Updated 3 years ago
- Spatially Resolved Gene Expression Prediction from H&E Histology Images via Bi-modal Contrastive Learning☆80Updated last year
- A unified approach for integrating spatial and single-cell transcriptomics data by leveraging deep generative models☆74Updated last year
- a unified single-cell data integration framework by optimal transport☆34Updated last year
- ☆153Updated 11 months ago
- Single-cell spatial elucidation through image-augmented graph transformer☆34Updated 2 years ago
- Masked Graph Autoencoders with Contrastive Augmentation for Spatially Resolved Transcriptomics Data☆18Updated last year
- ☆127Updated 3 years ago
- SpaGCN: Integrating gene expression, spatial location and histology to identify spatial domains and spatially variable genes by graph con…☆246Updated 2 years ago
- domain adaptation of spatial and single-cell transcriptome☆28Updated last year
- ☆13Updated last year
- SpatialGlue is a novel deep learning methods for spatial multi-omics data integration.☆73Updated last year
- ☆32Updated 10 months ago
- Repository for Nicheformer: a foundation model for single-cell and spatial omics☆127Updated last week
- ☆17Updated last week
- Enhancing spatial transcriptomics data by predicting the expression of unmeasured genes from a dissociated scRNA-seq data☆39Updated last year
- STAligner: Integrating spatial transcriptomics data across different conditions, technologies, and developmental stages☆24Updated last year
- A model developed for the generation of scRNA-seq data☆79Updated 9 months ago
- STAligner is a tool for alignment and integration of spatially resolved transcriptomics data.☆48Updated last year
- ☆10Updated last year