Deep Clustering Representation for Spatially Resolved Transcriptomics Data via Multi-view Variational Graph Auto-Encoders with Consensus Clustering
☆15Jun 24, 2025Updated 11 months ago
Alternatives and similar repositories for STMVGAE
Users that are interested in STMVGAE are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Masked adversarial neural network for cell type deconvolution (MACD) in spatial transcriptomics data☆14Jun 16, 2025Updated 11 months ago
- Masked Graph Autoencoders with Contrastive Augmentation for Spatially Resolved Transcriptomics Data☆19Aug 7, 2024Updated last year
- ☆16May 27, 2024Updated 2 years ago
- Pretrained-Guided Masked Conditional Diffusion Models for Microbiome Data Analysis☆14Aug 7, 2024Updated last year
- High-Resolution Spatial Transcriptomics Using Histology Images with HisToSGE (Pathology Image Large Model, Transformers)☆21Jul 24, 2024Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- We propose STG3Net, a novel method designed to integrate multiple SRT datasets and correct batch effects.☆14Aug 8, 2024Updated last year
- scASDC is an attention enhanced structural deep clustering method for scRNA-seq cell clustering☆17Aug 8, 2024Updated last year
- SpaDiT: Diffusion Transformer for Spatial Gene Expression Prediction using scRNA-seq☆25Jun 2, 2026Updated last week
- [Briefings in Bioinformatics 2025] A GCN and pathology image large model-based method to predict single-cell resolution spatial gene expr…☆26Dec 1, 2025Updated 6 months ago
- mclSTExp: Multimodal Contrastive Learning for Spatial Gene Expression Prediction Using Histology Images☆42Jan 10, 2025Updated last year
- [Advanced Science 2025] SpaBatch: Deep learning-based cross-slice integration and 3D spatial domain identification in spatial transcripto…☆19Nov 27, 2025Updated 6 months ago
- A self-supervised learning method with Vision Transformer as backbone network for resolution enhancement in spatial transcriptomics.☆10Aug 25, 2025Updated 9 months ago
- [PLoS Computational Biology 2025] Domain-Adversarial Masked Autoencoder (SpaDAMA) for cell type deconvolution in spatial transcriptomics …☆12Nov 6, 2025Updated 7 months ago
- [PLoS Computational Biology 2025] SpaMask: Dual Masking Graph Autoencoder with Contrastive Learning for Spatial Transcriptomics☆13Apr 8, 2025Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- We propose SpatialCVGAE, which uses multiple variational graph autoencoders with different initializations to simultaneously generate cor…☆13Jun 24, 2025Updated 11 months ago
- Transformer-based deep learning for spatial transcriptomics enhancement.☆12Mar 15, 2024Updated 2 years ago
- spatialDLPFC project involving Visium (n = 30), Visium SPG (n = 4) and snRNA-seq (n = 19) samples☆31Mar 26, 2026Updated 2 months ago
- Identify spatial domain☆92May 29, 2025Updated last year
- ☆11Oct 25, 2022Updated 3 years ago
- Code for the paper "Spectrum Guided Topology Augmentation for Graph Contrastive Learning"☆11Jul 18, 2023Updated 2 years ago
- Multi-slice Spatial Transcriptome Domain Analysis.☆13Dec 13, 2024Updated last year
- ☆26Sep 8, 2020Updated 5 years ago
- ☆11Sep 7, 2023Updated 2 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- This is a thesis template for Yunnan University, which is suitable for master students! 这里是一个云南大学硕士毕业论文模板latex。该模板是根据其云南大学毕业模板要求撰写，分享供大家使…☆17Jul 26, 2018Updated 7 years ago
- ☆17Feb 17, 2025Updated last year
- Source code from the book Machine Learning in Action, corrected the errors, updated according to python 3.X☆15Mar 3, 2019Updated 7 years ago
- Code of Graph Contrastive Partial Multi-View Clustering☆12Mar 10, 2025Updated last year
- Simple Contrastive Multi-View Clustering with Data-Level Fusion☆16Jul 25, 2025Updated 10 months ago
- ☆17Feb 18, 2025Updated last year
- Spatial Transcriptomics human DLPFC pilot study part of the spatialLIBD project☆97Mar 26, 2026Updated 2 months ago
- Code of Dual Contrast-Driven Deep Multi-View Clustering☆23Nov 3, 2024Updated last year
- Code for the spatialLIBD R/Bioconductor package and shiny app☆113May 20, 2026Updated 2 weeks ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- A collection of utility programs in MATLAB for use on Complex Networks☆20Oct 1, 2010Updated 15 years ago
- A flexible two-column Jekyll theme. Perfect for personal sites, blogs, and portfolios hosted on GitHub or your own server.☆25Jul 11, 2024Updated last year
- A Novel Federated Multi-View Clustering Method for Unaligned and Incomplete Data Fusion☆27Oct 13, 2024Updated last year
- Automated brain PET analysis pipeline☆29May 8, 2023Updated 3 years ago
- The official repo for "Self-weighted Contrastive Fusion for Deep Multi-view clustering" (TMM IF:8.4)☆44Jul 12, 2024Updated last year
- a unified single-cell data integration framework by optimal transport☆37Oct 1, 2024Updated last year
- STAligner is a tool for alignment and integration of spatially resolved transcriptomics data.☆51Apr 8, 2024Updated 2 years ago