Alternatives and similar repositories for AVIDa-SARS-CoV-2

Users that are interested in AVIDa-SARS-CoV-2 are comparing it to the libraries listed below

• agitter / adaptyvbio-egfr
  Sequences from Adaptyv Bio’s EGFR Protein Design Competition
  ☆13Updated 5 months ago
• moritzgls / ESM-Effect
  ☆11Updated 3 months ago
• aggelos-michael-papadopoulos / ParaSurf
  [Bioinformatics 2025] Official implementation of the paper "ParaSurf: A Surface-Based Deep Learning Approach for Paratope-Antigen Interac…
  ☆19Updated 2 weeks ago
• eva-smorodina / antibody_developability
  ☆9Updated 2 years ago
• strauchlab / scaffold_design
  ☆17Updated last year
• Merck / AbLEF
  Antibody Langauge Ensemble Fusion - fuses antibody structural ensemble and language representation for property prediction
  ☆11Updated last year
• WangLabforComputationalBiology / NanoBERTa-ASP
  Predicting Nanobody Binding Epitopes Based on a Pretrained RoBERTa-based Model
  ☆15Updated 11 months ago
• IBM / ReprogBERT
  Code for ICML 2023 paper "Reprogramming Pretrained Language Models for Antibody Sequence Infilling"
  ☆23Updated last year
• lehner-lab / domainome
  ☆13Updated 5 months ago
• deskk / AbGPT
  ☆10Updated 8 months ago
• brineylab / BALM-paper
  ☆17Updated 4 months ago
• debbiemarkslab / nanobody-polyreactivity
  Polyreactivity Website
  ☆13Updated last year
• ahaldane / Mi3-GPU
  ☆18Updated 2 months ago
• Profluent-AI / proseLM-public
  Adapting protein language models for structure-conditioned design
  ☆38Updated 9 months ago
• CarbonMatrixLab / immunefold
  Official open-source of Accurate structure prediction of immune proteins using parameter-efficient transfer learning
  ☆21Updated last month
• CongLabCode / RoseTTAFold2-PPI
  Fast deep learning methods for large-scale protein-protein interaction screening
  ☆39Updated 2 weeks ago
• wells-wood-research / PDBench
  PDBench is a dataset and software package for evaluating fixed-backbone sequence design algorithms.
  ☆29Updated 2 years ago
• yjcyxky / antibody-dl
  A Collection of Platform, Tools, and Resources for Antibody Engineering
  ☆16Updated last year
• snerligit / mhc-pep-threader
  ☆12Updated 4 years ago
• JSchlensok / VespaG
  Expert-Guided Protein Language Models enable Accurate and Blazingly Fast Fitness Prediction
  ☆14Updated 2 months ago
• adaptyvbio / ProtFill
  Inpainting protein sequence and structure
  ☆12Updated last year
• KULL-Centre / _2023_Blaabjerg_SSEmb
  ☆35Updated 8 months ago
• daisybio / data-leakage-ppi-prediction
  Code associated with the paper 'Cracking the blackbox of deep sequence-based protein-protein interaction prediction'
  ☆24Updated last year
• cognano / AVIDa-hIL6
  Code for NeurIPS 2023 paper "AVIDa-hIL6: A Large-Scale VHH Dataset Produced from an Immunized Alpaca for Predicting Antigen-Antibody Inte…
  ☆18Updated 6 months ago
• AI4PDLab / ProtRL
  ☆60Updated this week
• beckham-lab / EpHod
  Machine learning prediction of enzyme optimum pH
  ☆38Updated 2 weeks ago
• mgreenig / IgCraft
  Versatile human antibody sequence design
  ☆15Updated last month
• oxpig / AbLang2
  An antibody-specific language model focusing on NGL prediction
  ☆27Updated 8 months ago
• PDBeurope / protein-cluster-conformers
  Clusters protein chains based on CA distance difference
  ☆14Updated 3 months ago
• seanrjohnson / protein_scoring
  Generating and scoring novel enzyme sequences with a variety of models and metrics
  ☆69Updated 4 months ago