Base-pair resolution detection of transcription factor binding site by deep deconvolutional network
☆11Sep 12, 2017Updated 9 years ago
Alternatives and similar repositories for DeepSNR
Users that are interested in DeepSNR are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆14May 26, 2020Updated 6 years ago
- ☆12Nov 9, 2020Updated 5 years ago
- PEDLA: predicting enhancers with deep learning-based algorithmic framework☆16Jan 6, 2016Updated 10 years ago
- R package for high-throughput DNA shape predictions and feature encoding☆20Jul 1, 2021Updated 5 years ago
- ☆15Jun 24, 2017Updated 9 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- BPNet manuscript code.☆12Dec 1, 2020Updated 5 years ago
- Repository for the code for DeepATAC project presented at WCB workshop in ICML2017☆22Aug 9, 2017Updated 9 years ago
- Docker image for the DeepBind method.☆16Nov 7, 2015Updated 10 years ago
- Predicting TF sequence-specificity similarity with weighted alignments☆13Oct 7, 2019Updated 7 years ago
- Effector and Perturbation Estimation Engine (EPEE) conducts differential analysis of transcription factor activity from gene expression d…☆16Oct 3, 2019Updated 7 years ago
- Training and using TFFM/PSSM/4-bits + DNA shape classifiers☆13Jun 11, 2018Updated 8 years ago
- This is a mirror, please report bugs to☆15Oct 13, 2026Updated last week
- Prediction of the 3D structure of the genome through statistically significant Hi-C contacts.☆21Aug 7, 2018Updated 8 years ago
- Real-time fraud transaction detection system☆26Aug 28, 2024Updated 2 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- A deep learning package for predicting TF binding☆43Jan 23, 2020Updated 6 years ago
- JEME method for predicting enhancer targets☆11Jul 15, 2017Updated 9 years ago
- Scripts and data for Duran & Thiergart et al. Cell, 2018☆24May 3, 2019Updated 7 years ago
- A hybrid deep convolutional neural network for predicting chromatin accessibility☆25Apr 10, 2019Updated 7 years ago
- Predicting ncRNA-protein interaction using high-level features based on deep learning☆15May 2, 2020Updated 6 years ago
- A deep learning-based tool for alignment and integration of single cell genomic data across multiple datasets, species, conditions, batch…☆39Nov 16, 2021Updated 4 years ago
- Selecting features as (network) nodes☆11May 27, 2018Updated 8 years ago
- ☆10Jan 19, 2019Updated 7 years ago
- A simple program to run a INDI server☆13Jul 7, 2026Updated 3 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A Graphical program to Manage, Configure, Launch, and Monitor an INDI WebManager on OS X and Linux☆10Sep 20, 2026Updated last month
- Domain adaptation networks for digit recognitioning☆14Oct 6, 2017Updated 9 years ago
- Make machine learning simpler with Galaxy☆12Sep 29, 2026Updated 3 weeks ago
- Predict the boundary of transcript start and end from RNA-seq reads alignment☆11Feb 13, 2017Updated 9 years ago
- ☆13Jul 5, 2019Updated 7 years ago
- ☆57May 23, 2026Updated 4 months ago
- Concise: Keras extension for regulatory genomics☆36Dec 26, 2022Updated 3 years ago
- R package for reading in & working with NucleoATAC outputs☆26Oct 13, 2018Updated 8 years ago
- ☆10Apr 10, 2016Updated 10 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A GUI for Starnet++☆13Sep 16, 2022Updated 4 years ago
- An R package to correct for sequence bias in RNA-Seq experiments.☆10Aug 7, 2011Updated 15 years ago
- ☆10Dec 12, 2017Updated 8 years ago
- CS273B Deep Learning for Genomics Course Materials☆36Sep 9, 2020Updated 6 years ago
- Immune deconvolution of publicly available TCGA expression data☆11Jan 28, 2019Updated 7 years ago
- ☆19Aug 29, 2025Updated last year
- Making Snakemake workflows into full-fledged command line tools since 1999.☆51Apr 19, 2018Updated 8 years ago