Alternatives and similar repositories for pybioviz

Users that are interested in pybioviz are comparing it to the libraries listed below

• genepattern / genepattern-notebook
  Platform for integrating genomic analysis with Jupyter Notebooks.
  ☆44Updated 2 months ago
• Zsailer / phylopandas
  Pandas DataFrames for phylogenetics
  ☆74Updated 4 years ago
• harmslab / epistasis
  A Python API for estimating statistical high-order epistasis in genotype-phenotype maps.
  ☆35Updated 2 years ago
• stracquadaniolab / pygna
  A Python package for gene network analysis
  ☆32Updated 3 years ago
• mfitzp / padua
  Proteomic Data Analysis with Python (pandas, scikit-learn, numpy, scipy)
  ☆24Updated 2 years ago
• openvax / pepdata
  Python interface to amino acid properties and IEDB
  ☆57Updated last year
• kundajelab / genomelake
  Simple and efficient access to genomic data for deep learning models.
  ☆42Updated 5 years ago
• Ad115 / EnsemblRest
  A Python interface to the Ensembl REST APIs, biological data at your fingertips.
  ☆12Updated last year
• kundajelab / simdna
  A python library for creating simulated regulatory DNA sequences
  ☆39Updated 2 years ago
• jvrana / benchling-api
  A python wrapper for the benchling api
  ☆50Updated 5 years ago
• gawbul / pyEnsemblRest
  A client for the Ensembl REST API written in the Python programming language
  ☆27Updated 3 months ago
• davek44 / utility
  Computational biology utility scripts
  ☆19Updated 5 months ago
• jbloomlab / dmslogo
  draw sequence logos tailored to deep mutational scanning (DMS) data
  ☆12Updated last year
• jbkinney / mavenn
  MAVE-NN: genotype-phenotype maps from multiplex assays of variant effect
  ☆28Updated last month
• apierleoni / BioGraPy
  Biological Graphic tool in Python
  ☆34Updated 5 years ago
• broadinstitute / genepy
  Genepy is an open source utils package covering a range of useful functions for large scale genomics data analysis in python
  ☆21Updated 2 years ago
• brentp / fishers_exact_test
  Fishers Exact Test for Python (Cython)
  ☆66Updated 6 months ago
• kundajelab / ENCODE_downloader
  Downloader for ENCODE
  ☆32Updated 5 years ago
• boscoh / uniprot
  retrieve protein sequence identifiers and metadata from http://uniprot.org
  ☆67Updated 3 years ago
• ArcInstitute / ScreenPro2
  Flexible analysis of high-content CRISPR screening
  ☆31Updated last month
• nfusi / qvalue
  Converts p-values in q-values, see (Storey and Tibshirani, 2003)
  ☆29Updated 8 years ago
• lgautier / fastq-and-furious
  Efficient handling of FASTQ files from Python
  ☆51Updated 2 months ago
• saketkc / pyseqlogo
  Python package to plot sequence logos
  ☆29Updated 2 years ago
• omarwagih / rmimp
  Predicting the impact of mutations on kinase–substrate phosphorylation
  ☆10Updated 2 years ago
• BIMSBbioinfo / maui
  Multi-omics Autoencoder Integration: Deep learning-based heterogenous data analysis toolkit
  ☆49Updated 2 years ago
• ericmjl / Circos
  ☆15Updated 2 years ago
• statbiophys / SONIA
  Infer selection pressures on features of amino acid CDR3 sequences.
  ☆24Updated last year
• aquaskyline / Skyhawk
  An Artificial Neural Network-based discriminator for validating clinically significant genomic variants
  ☆35Updated last year
• EmanuelGoncalves / crispy
  Python module to analyse CRISPR-based libraries
  ☆13Updated 4 years ago
• jbloomlab / alignparse
  Align sequences and then parse features.
  ☆17Updated 6 months ago