thucombio / deepnet-rbpLinks
☆20Updated 10 years ago
Alternatives and similar repositories for deepnet-rbp
Users that are interested in deepnet-rbp are comparing it to the libraries listed below
Sorting:
- Concise: Keras extension for regulatory genomics☆35Updated 2 years ago
- ☆51Updated last year
- Flexible Integration of Data with Deep LEarning☆50Updated 2 years ago
- A deep learning package for predicting TF binding☆42Updated 5 years ago
- Deep learning for identifying cis-regulatory elements and other applications☆34Updated 8 years ago
- Repository for the code for DeepATAC project presented at WCB workshop in ICML2017☆22Updated 8 years ago
- Deep Feature Interaction Maps (DFIM)☆54Updated 6 years ago
- Downloader for ENCODE☆32Updated 5 years ago
- Python module for the easy handling and analysis of DNase-seq data☆37Updated 6 years ago
- Ranked vaccine peptides for personalized cancer immunotherapy☆58Updated last year
- Computational biology utility scripts☆19Updated 5 months ago
- 3D hotspot mutation proximity analysis tool☆48Updated 2 years ago
- PEDLA: predicting enhancers with deep learning-based algorithmic framework☆16Updated 9 years ago
- Scripts for building computational models of gene regulation with tensorflow☆27Updated 2 years ago
- Dimensionality reduction for single cell RNA-seq data☆36Updated 5 years ago
- Annotation of genomic regions using transcription factor binding sites and epigenetic data☆41Updated 3 years ago
- This repository is the working directory for the Garnet-Forest bundle of python scripts for analyzing diverse forms of 'omic' data in a n…☆31Updated 6 years ago
- Multi-omics Autoencoder Integration: Deep learning-based heterogenous data analysis toolkit☆49Updated 2 years ago
- ☆14Updated 5 years ago
- Wishbone is an algorithm to align cells along developmental trajectories with branches☆42Updated 5 years ago
- Prediction of the 3D structure of the genome through statistically significant Hi-C contacts.☆21Updated 7 years ago
- PAthway Representation and Analysis by Direct Inference on Graphical Models☆46Updated 7 years ago
- Search across publicly available datasets to find instances where a drug or cell line of interest has been profiled.☆46Updated 7 years ago
- Simple and efficient access to genomic data for deep learning models.☆42Updated 5 years ago
- Generate cellular maps of differentiation manifolds with complex topologies.☆27Updated 7 years ago
- Extension of the WGCNA program to improve the eigengene similarity of modules and increase the overall number of genes in modules.☆65Updated 4 years ago
- Coda: a convolutional denoising algorithm for genome-wide ChIP-seq data☆33Updated 8 years ago
- ☆21Updated 8 years ago
- A quick and flexible single-cell RNA-seq processing framework on the cloud☆39Updated 5 years ago
- Bioinformatics pipeline for selecting patient-specific cancer neoantigen vaccines☆86Updated 3 weeks ago