thucombio / deepnet-rbpLinks
☆20Updated 9 years ago
Alternatives and similar repositories for deepnet-rbp
Users that are interested in deepnet-rbp are comparing it to the libraries listed below
Sorting:
- Python module for the easy handling and analysis of DNase-seq data☆37Updated 5 years ago
- Concise: Keras extension for regulatory genomics☆35Updated 2 years ago
- Flexible Integration of Data with Deep LEarning☆50Updated 2 years ago
- Coda: a convolutional denoising algorithm for genome-wide ChIP-seq data☆33Updated 7 years ago
- Repository for the code for DeepATAC project presented at WCB workshop in ICML2017☆22Updated 7 years ago
- A Python package for gene network analysis☆32Updated 3 years ago
- ☆51Updated last year
- Scripts for building computational models of gene regulation with tensorflow☆27Updated 2 years ago
- Saluki, a method to predict mRNA half-lives from sequence☆24Updated 2 years ago
- A deep learning package for predicting TF binding☆42Updated 5 years ago
- Generate cellular maps of differentiation manifolds with complex topologies.☆26Updated 7 years ago
- Deep Feature Interaction Maps (DFIM)☆53Updated 6 years ago
- ImReP is a computational method for rapid and accurate profiling of the adaptive immune repertoire from regular RNA-Seq data.☆28Updated 5 years ago
- ☆31Updated 5 years ago
- Computational biology utility scripts☆19Updated 2 months ago
- Code for the paper "A comprehensive examination of Nanopore native RNA sequencing for characterization of complex transcriptomes"☆19Updated 5 years ago
- 3D hotspot mutation proximity analysis tool☆47Updated 2 years ago
- Decomposition-based peak identification, which find peaks across a large number of TSS (transcription starting site) profiles☆15Updated 7 years ago
- Dimensionality reduction for single cell RNA-seq data☆35Updated 5 years ago
- ☆14Updated 5 years ago
- Processing, quality control and analysis of GAM datsets☆9Updated 2 years ago
- Downloader for ENCODE☆32Updated 4 years ago
- ⚙️ Matching T-cell repertoire against a database of TCR antigen specificities☆38Updated 6 years ago
- This repository is the working directory for the Garnet-Forest bundle of python scripts for analyzing diverse forms of 'omic' data in a n…☆31Updated 6 years ago
- ☆19Updated 7 years ago
- Hierarchical HotNet is an algorithm for finding hierarchies of active subnetworks.☆38Updated 5 years ago
- DLPRB: A Deep Learning Approach for Predicting Protein-RNA Binding☆13Updated 6 years ago
- Core functionality of the CGAT code☆33Updated 5 months ago
- Simple and efficient access to genomic data for deep learning models.☆43Updated 5 years ago
- scRNAseq integration with triplet neural networks☆41Updated 2 years ago