Alternatives and similar repositories for DeepFold

Users that are interested in DeepFold are comparing it to the libraries listed below

• lamoureux-lab / 3DCNN_MQA
  Deep convolutional networks for fold recognition
  ☆22Updated 6 years ago
• aqlaboratory / pnerf
  ☆36Updated 6 years ago
• jertubiana / ProteinMotifRBM
  Learning Protein Constitutive Motifs from Sequence Data: RBM toolbox
  ☆20Updated 7 years ago
• ehsanasgari / Deep-Proteomics
  ☆52Updated 5 years ago
• hashemifar / DPPI
  A convolutional neural network to predict PPI interactions
  ☆42Updated 7 years ago
• JaesikKim / HiG2Vec
  ☆23Updated 2 years ago
• songlab-cal / mogwai
  ☆25Updated 3 years ago
• xypan1232 / iDeepS
  inferring sequence-structure motifs using deep learning
  ☆40Updated 2 years ago
• mikejhuang / PhageProtVec
  Amino Acid Embedding Representation as Machine Learning Features
  ☆20Updated 7 years ago
• oxpig / saab_plus
  ☆27Updated 6 years ago
• largelymfs / deepcontact
  DeepContact Software
  ☆26Updated 7 years ago
• ba-lab / pdnet
  PDNET: A fully open-source framework for deep learning protein real-valued distances
  ☆36Updated 4 years ago
• sokrypton / seqmodels
  ☆33Updated 4 months ago
• HYsxe / ACME
  Supplementary data for the ACME algorithm
  ☆23Updated 3 years ago
• MedChaabane / deepRAM
  End-to-end deep learning toolkit for predicting protein binding sites and motifs.
  ☆45Updated 6 years ago
• samsinai / VAE_protein_function
  Protein function prediction using a variational autoencoder
  ☆93Updated 7 years ago
• alrojo / UniLanguage
  Homology reduced UniProt, train-/valid-/testsets for language modeling
  ☆16Updated 3 years ago
• eliberis / parapred
  Paratope Prediction using Deep Learning
  ☆61Updated 2 years ago
• sbl-sdsc / mmtf-genomics
  Methods for mapping genomic data onto 3D protein structure.
  ☆28Updated 3 years ago
• xypan1232 / iDeep
  iDeep: integrated prediction of RNA-protein binding sites using deep learning
  ☆39Updated 5 years ago
• aedera / anc2vec
  Unsupervised neural network for learning embeddings of GO terms.
  ☆20Updated 3 years ago
• emmijokinen / mgpfusion
  mGPfusion is a Gaussian process based method for predicting stability changes upon single and multiple mutations of proteins that comple…
  ☆15Updated 7 years ago
• MannLabs / structuremap_analysis
  Analysis workflow for investigating the structural context of PTMs
  ☆11Updated 2 years ago
• jwillis0720 / sadie
  The Complete Python Antibody Library
  ☆24Updated last week
• psipred / DMPfold
  De novo protein structure prediction using iteratively predicted structural constraints
  ☆60Updated 4 years ago
• churchlab / UniRep-analysis
  Analysis and figure code from Alley et al. 2019.
  ☆59Updated 2 years ago
• songlab-cal / factored-attention
  This repository contains code for reproducing results in our paper Interpreting Potts and Transformer Protein Models Through the Lens of …
  ☆59Updated 3 years ago
• amirmohan / epistatic-net
  Epistatic Net is an algorithm which allows for spectral regularization of deep neural networks to predict biological fitness functions (e…
  ☆18Updated 4 years ago
• IdoSpringer / ERGO
  ERGO is a deep learing based model for predicting TCR-peptide binding.
  ☆18Updated 3 years ago
• aqlaboratory / hsm
  Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."
  ☆71Updated last year