Alternatives and similar repositories for DeepFold

Users that are interested in DeepFold are comparing it to the libraries listed below

• xypan1232 / iDeepS
  inferring sequence-structure motifs using deep learning
  ☆40Updated 2 years ago
• lamoureux-lab / 3DCNN_MQA
  Deep convolutional networks for fold recognition
  ☆22Updated 6 years ago
• songlab-cal / mogwai
  ☆25Updated 3 years ago
• aqlaboratory / pnerf
  ☆36Updated 6 years ago
• sbl-sdsc / mmtf-genomics
  Methods for mapping genomic data onto 3D protein structure.
  ☆28Updated 3 years ago
• hashemifar / DPPI
  A convolutional neural network to predict PPI interactions
  ☆42Updated 7 years ago
• JaesikKim / HiG2Vec
  ☆23Updated 2 years ago
• jertubiana / ProteinMotifRBM
  Learning Protein Constitutive Motifs from Sequence Data: RBM toolbox
  ☆20Updated 6 years ago
• oxpig / saab_plus
  ☆26Updated 5 years ago
• ba-lab / pdnet
  PDNET: A fully open-source framework for deep learning protein real-valued distances
  ☆36Updated 4 years ago
• johli / scrambler
  Interpretation by Deep Generative Masking for Biological Sequences
  ☆37Updated 4 years ago
• mikejhuang / PhageProtVec
  Amino Acid Embedding Representation as Machine Learning Features
  ☆20Updated 7 years ago
• HYsxe / ACME
  Supplementary data for the ACME algorithm
  ☆23Updated 3 years ago
• MedChaabane / deepRAM
  End-to-end deep learning toolkit for predicting protein binding sites and motifs.
  ☆45Updated 6 years ago
• largelymfs / deepcontact
  DeepContact Software
  ☆26Updated 7 years ago
• IdoSpringer / ERGO
  ERGO is a deep learing based model for predicting TCR-peptide binding.
  ☆18Updated 3 years ago
• ehsanasgari / Deep-Proteomics
  ☆52Updated 5 years ago
• alrojo / UniLanguage
  Homology reduced UniProt, train-/valid-/testsets for language modeling
  ☆16Updated 3 years ago
• samsinai / VAE_protein_function
  Protein function prediction using a variational autoencoder
  ☆95Updated 7 years ago
• sokrypton / seqmodels
  ☆32Updated 2 months ago
• minxueric / ismb2017_lstm
  Chromatin Accessibility Prediction via Convolutional Long Short-Term Memory Networks with k-mer Embedding
  ☆14Updated 7 years ago
• WesleyyC / Amino-Acid-Embedding
  Train an Amino Acid Embeddings (or a dragon?)
  ☆17Updated 8 years ago
• psipred / DMPfold
  De novo protein structure prediction using iteratively predicted structural constraints
  ☆60Updated 3 years ago
• psipred / DeepCov
  Fully convolutional neural networks for protein residue-residue contact prediction
  ☆43Updated 6 years ago
• vam-sin / CATHe
  Deep Learning tool trained on protein sequence embeddings from protein language models to accurately detect remote homologues for CATH su…
  ☆13Updated 3 years ago
• xypan1232 / iDeep
  iDeep: integrated prediction of RNA-protein binding sites using deep learning
  ☆39Updated 5 years ago
• openvax / pepnet
  Neural networks for amino acid sequences
  ☆21Updated 7 years ago
• liudan111 / PLM-interact
  PLM-interact: extending protein language models to predict protein-protein interactions.
  ☆51Updated 3 months ago
• songlab-cal / factored-attention
  This repository contains code for reproducing results in our paper Interpreting Potts and Transformer Protein Models Through the Lens of …
  ☆58Updated 3 years ago
• yfCuiFaith / DeepCSeqSite
  Protein-ligand binding sites prediction toolkits
  ☆21Updated 6 years ago