largelymfs / DeepFold
Learning structural motif representations for efficient protein structure search
☆18Updated 7 years ago
Related projects: ⓘ
- ☆23Updated last year
- ☆23Updated 4 years ago
- ☆25Updated 2 years ago
- Universal Transforming Geometric Network for protein structure prediction.☆8Updated 4 years ago
- Methods for mapping genomic data onto 3D protein structure.☆27Updated 2 years ago
- Learning Protein Constitutive Motifs from Sequence Data: RBM toolbox☆20Updated 5 years ago
- ERGO is a deep learing based model for predicting TCR-peptide binding.☆17Updated 2 years ago
- DeepContact Software☆26Updated 6 years ago
- Interpretation by Deep Generative Masking for Biological Sequences☆34Updated 2 years ago
- Epistatic Net is an algorithm which allows for spectral regularization of deep neural networks to predict biological fitness functions (e…☆17Updated 3 years ago
- End-to-end deep learning toolkit for predicting protein binding sites and motifs.☆44Updated 5 years ago
- Train an Amino Acid Embeddings (or a dragon?)☆17Updated 7 years ago
- ☆13Updated 4 years ago
- Supplementary data for the ACME algorithm☆22Updated last year
- Predict the boundary of transcript start and end from RNA-seq reads alignment☆11Updated 7 years ago
- inferring sequence-structure motifs using deep learning☆36Updated last year
- Homology reduced UniProt, train-/valid-/testsets for language modeling☆16Updated 2 years ago
- Stochastic Sequence Propagation - A Keras Model for optimizing DNA, RNA and protein sequences based on a predictor☆41Updated last month
- ☆29Updated 3 years ago
- Chromatin Accessibility Prediction via Convolutional Long Short-Term Memory Networks with k-mer Embedding☆14Updated 5 years ago
- Deep learning based alignment-free method for protein family modeling and prediction☆17Updated 6 years ago
- Neural networks for amino acid sequences☆20Updated 6 years ago
- iDeep: integrated prediction of RNA-protein binding sites using deep learning☆39Updated 3 years ago
- Python Bioinformatics Toolkit for CATH (Protein Classification Database @ UCL)☆14Updated last year
- Predicting mechanism of action of novelcompounds using compound structure andtranscriptomic signature co-embedding☆13Updated 11 months ago
- ☆34Updated 5 years ago
- Deep convolutional networks for fold recognition☆22Updated 4 years ago
- PointNet for Deep Rank: protein-protein interaction scoring using neural networks☆9Updated 4 years ago
- ☆23Updated this week
- Pytorch implementation of BionoiNet, which is a deep learning-based software to classify ligand-binding sites.☆19Updated 3 years ago