Training and testing of DeepSEA models.
☆16Oct 19, 2015Updated 10 years ago
Alternatives and similar repositories for DeepSEA
Users that are interested in DeepSEA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- DeepSEA in TensorFlow☆32May 24, 2017Updated 9 years ago
- PEDLA: predicting enhancers with deep learning-based algorithmic framework☆16Jan 6, 2016Updated 10 years ago
- ☆15Nov 19, 2018Updated 7 years ago
- ☆13Jul 5, 2019Updated 6 years ago
- ChIP-seq peak calling with GC effects adjustment☆10Jul 5, 2018Updated 7 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- DeepSEA (Bioinformatics) implemented by tensorflow.☆22Jan 15, 2020Updated 6 years ago
- Implementation of hotspot2 by Eric Rynes☆18May 11, 2023Updated 3 years ago
- Information Constraints on Auto-Encoding Variational Bayes☆11May 24, 2018Updated 8 years ago
- Deep learning for identifying cis-regulatory elements and other applications☆34Nov 21, 2016Updated 9 years ago
- Predict the boundary of transcript start and end from RNA-seq reads alignment☆11Feb 13, 2017Updated 9 years ago
- ☆12Oct 9, 2018Updated 7 years ago
- practice fusion contest☆11Dec 10, 2012Updated 13 years ago
- Highly scalable integration and classification of single-cell RNA sequencing data☆11Dec 27, 2020Updated 5 years ago
- Convolutional neural network analysis for predicting DNA sequence activity.☆267Sep 14, 2020Updated 5 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Training and using TFFM/PSSM/4-bits + DNA shape classifiers☆13Jun 11, 2018Updated 8 years ago
- An actionable database of publicly available single-cell RNA-seq data☆41Apr 13, 2019Updated 7 years ago
- Theano-based Deep Learning library (convnets, recurrent neural networks, and more).☆14Aug 2, 2017Updated 8 years ago
- Text-mined knowledgebase for drivers, oncogenes and tumor suppressors in cancer☆42Dec 16, 2025Updated 6 months ago
- ☆11Feb 3, 2026Updated 4 months ago
- Hotspot is a program for identifying genomic regions of local enrichment of short-read sequence tags.☆16Apr 12, 2014Updated 12 years ago
- Representation Learning for detection of phenotype-associated cell subsets☆68Oct 24, 2020Updated 5 years ago
- ☆21Sep 4, 2020Updated 5 years ago
- Use gene expression to predict phenotype sample information☆19Feb 13, 2018Updated 8 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆20Jul 20, 2015Updated 10 years ago
- Deduplication for cfDNA sequencing data☆11Jul 5, 2017Updated 8 years ago
- Source code and data for ACL 2019 paper "Modeling Semantic Compositionality with Sememe Knowledge"☆34Jul 30, 2020Updated 5 years ago
- open source high throughput homogeneous liquid handler ( automated pipette )☆17Sep 20, 2011Updated 14 years ago
- 深度学习入门2 自然语言处理(NLP)篇 一书源代码的 jupyter 版（https://github.com/oreilly-japan/deep-learning-from-scratch-2）☆19Apr 25, 2019Updated 7 years ago
- R package for high-throughput DNA shape predictions and feature encoding☆20Jul 1, 2021Updated 4 years ago
- For original Nature Biotechnology Publication (Q1 2012)☆27Jul 9, 2017Updated 8 years ago
- stageR package☆13May 8, 2026Updated last month
- Sample Level Analysis of Pathway Alteration Enrichments☆10Jan 21, 2019Updated 7 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- R Data: Single cell RNA sequencing of human liver reveals distinct intrahepatic macrophage populations☆32May 12, 2020Updated 6 years ago
- Python module for the easy handling and analysis of DNase-seq data☆37Jul 18, 2019Updated 6 years ago
- Some recent state-of-the-art generative models in ONE notebook: (MIX-)?(GAN|WGAN|BigGAN|MHingeGAN|AMGAN|StyleGAN|StyleGAN2)(\+ADA|\+CR|\+…☆18Oct 19, 2020Updated 5 years ago
- fast webservices based query tool for large sets of genomic features☆26May 10, 2025Updated last year
- ☆10Jun 29, 2021Updated 4 years ago
- Meta Pattern Discovery from Massive Text Corpora☆62Feb 15, 2021Updated 5 years ago
- Source Code for KDD'19 paper "SurfCon: Synonym Discovery on Privacy-Aware Clinical Data"☆10Apr 10, 2020Updated 6 years ago