jisraeli / DeepSEALinks
Training and testing of DeepSEA models.
☆15Updated 10 years ago
Alternatives and similar repositories for DeepSEA
Users that are interested in DeepSEA are comparing it to the libraries listed below
Sorting:
- Deep Feature Interaction Maps (DFIM)☆54Updated 6 years ago
- Python module for the easy handling and analysis of DNase-seq data☆37Updated 6 years ago
- Understanding sequence conservation with deep learning☆20Updated 8 years ago
- PEDLA: predicting enhancers with deep learning-based algorithmic framework☆16Updated 9 years ago
- Flexible Integration of Data with Deep LEarning☆51Updated 2 years ago
- Ranked vaccine peptides for personalized cancer immunotherapy☆58Updated last year
- Data and code related to the paper "ADAGE-Based Integration of Publicly Available Pseudomonas aeruginosa..." Jie Tan, et al · mSystems · …☆61Updated 9 years ago
- Deep learning for identifying cis-regulatory elements and other applications☆34Updated 8 years ago
- A deep learning package for predicting TF binding☆42Updated 5 years ago
- Simple and efficient access to genomic data for deep learning models.☆42Updated 5 years ago
- Coda: a convolutional denoising algorithm for genome-wide ChIP-seq data☆33Updated 8 years ago
- ☆51Updated last year
- ☆31Updated 6 years ago
- ☆13Updated 6 years ago
- python (cython) wrapper for https://github.com/ryanlayer/giggle for fast interval searching of huge datasets.☆16Updated 7 years ago
- Concise: Keras extension for regulatory genomics☆35Updated 2 years ago
- Code for the paper "Integrating regulatory DNA sequence and gene expression to predict genome-wide chromatin accessibility across cellula…☆44Updated 4 years ago
- Bioinformatics16: DeepChrome: Deep-learning for predicting gene expression from histone modifications☆63Updated 4 years ago
- Standard set of data-loaders for training and making predictions for DNA sequence-based models.☆82Updated last year
- ☆20Updated 10 years ago
- Wasserstein Generative Adversarial Network for analysing scRNAseq data☆34Updated 4 years ago
- Annotation of genomic regions using transcription factor binding sites and epigenetic data☆41Updated 3 years ago
- Tissue-specific variant effect predictions on splicing☆42Updated 2 years ago
- ☆56Updated 5 years ago
- 3D hotspot mutation proximity analysis tool☆49Updated 2 years ago
- A Feature Density Estimator for High-Throughput Sequence Tags☆22Updated 4 years ago
- Computational biology utility scripts☆19Updated 6 months ago
- A hybrid deep convolutional neural network for predicting chromatin accessibility☆25Updated 6 years ago
- DeepSEA in TensorFlow☆29Updated 8 years ago
- Signed LD profile regression code☆18Updated 2 months ago