GenomiqueENS / toulligQCLinks
A post sequencing QC tool for Oxford Nanopore sequencers
☆103Updated 3 months ago
Alternatives and similar repositories for toulligQC
Users that are interested in toulligQC are comparing it to the libraries listed below
Sorting:
- ☆46Updated 2 weeks ago
- Wally: Visualization of aligned sequencing reads and contigs☆120Updated 3 weeks ago
- ☆50Updated last month
- Research release basecalling models and configurations☆115Updated 5 months ago
- seqfu - Sequece Fastx Utilities☆121Updated 3 weeks ago
- A tool to identify, orient, trim and rescue full length cDNA reads☆83Updated 3 years ago
- Snakemake pipelines for nanopore sequencing data archiving and processing☆91Updated 3 years ago
- GenMap - Fast and Exact Computation of Genome Mappability☆113Updated last year
- Dotplot large Genomes in an Interactive, Efficient and Simple way☆108Updated 3 weeks ago
- ☆79Updated 5 years ago
- 🚀 LiftOn: Accurate annotation mapping for GFF/GTF across assemblies☆113Updated 3 months ago
- RNA modifications detection from Nanopore dRNA-Seq data☆87Updated last month
- reference-free transcriptome assembly for short and long reads☆107Updated last year
- Hybrid error correction of long reads using colored de Bruijn graphs☆106Updated last month
- Lima - Demultiplex Barcoded PacBio Samples☆67Updated 5 months ago
- Meta-pipeline to identify transposable element insertions using next generation sequencing data☆104Updated 5 months ago
- Quickly calculate and visualize sequence coverage in alignment files☆100Updated 6 years ago
- GraphMap - A highly sensitive and accurate mapper for long, error-prone reads http://www.nature.com/ncomms/2016/160415/ncomms11307/full/n…☆68Updated 3 years ago
- This repository hosts a large collection of Nextflow snippets☆56Updated 9 months ago
- Read, manipulate and visualize 'Pairwise mApping Format' data in R☆74Updated 4 years ago
- Assembly statistic visualisation☆90Updated last year
- Simple bacterial assembly and annotation pipeline☆78Updated 2 weeks ago
- Toolkit for calling structural variants using short or long reads☆109Updated last month
- Simple pileup-based variant caller☆93Updated 6 months ago
- A flexible, scalable, and reproducible pipeline to automate variant calling from raw sequence reads, with lots of bells and whistles - fo…☆108Updated 4 months ago
- Visualise and analyse nanopore (ONT) raw signals☆122Updated last month
- Tools to annotate genomes using long read transcriptomics data☆46Updated 4 years ago
- Same species annotation lift over pipeline.☆98Updated 2 years ago
- ☆119Updated last week
- A catalogue of available long read sequencing data analysis tools☆80Updated last month