vsbuffalo / slimflow
☆13Updated 4 months ago
Alternatives and similar repositories for slimflow:
Users that are interested in slimflow are comparing it to the libraries listed below
- Sampling and inference of genealogies with recombination☆30Updated 6 months ago
- Fast and simple simulation-based population genetic inference in R☆27Updated 3 weeks ago
- ☆20Updated 6 months ago
- ☆13Updated last year
- A package for population structure inference from RAD-seq data☆31Updated 3 years ago
- PREQUAL: a pre-alignment quality filter for comparative sequence analyses☆31Updated 2 years ago
- ☆18Updated last year
- A genome-wide IM blockwise likelihood estimation toolkit☆16Updated 9 months ago
- Bayesian gene tree reconciliation and WGD inference using amalgamated likelihood estimation☆15Updated 2 years ago
- EM-PCA for Ultra-low Coverage Sequencing Data☆18Updated 3 months ago
- This repository provides source code for several pipelines dedicated to the alignment of nucleotide coding sequences that are based on MA…☆34Updated last year
- machine learning applications for dadi☆15Updated 2 months ago
- Framework for analyzing low depth NGS data in heterogeneous populations using PCA.☆49Updated 2 months ago
- ABLE - Approximate Blockwise Likelihood Estimation☆17Updated 6 years ago
- Script for removing or counting invariant sites for the RAxML ascertainment bias corrections☆14Updated 6 months ago
- ☆17Updated last week
- Site frequency spectrum estimation based on window expectation-maximisation algorithm☆13Updated last year
- An R package to detect selection in biological pathways☆14Updated last year
- Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and b…☆37Updated last year
- Performing highly efficient genome scans for local adaptation with R package pcadapt v4☆40Updated 6 months ago
- BITE: BioInformatics tools for everyone☆19Updated 8 months ago
- General purpose population genetics software☆13Updated 5 years ago
- ☆19Updated 10 months ago
- Distinguishing among modes of convergent adaptation using population genomic data: statistical inference method, extensions, and examples☆13Updated 5 years ago
- Suite of tools for pangenomics built using vg☆22Updated last week
- Modification of BayesAss 3.0.4 to allow handling of large SNP datasets☆16Updated 3 years ago
- ☆11Updated last year
- Scripts for reformatting data. Mainly from tab separated to an esoteric program specific format☆13Updated 2 months ago
- Sampling and manipulating genome-wide ancestral recombination graphs (ARGs)☆13Updated last year
- Tools for inference of the DFE with dadi☆14Updated 4 years ago