Alternatives and similar repositories for pipetaxon

Users that are interested in pipetaxon are comparing it to the libraries listed below

• qibebt-bioinfo / meta-storms
  Meta-Storms 2 is the standalone implementation of the Microbiome Search Engine (MSE; http://mse.ac.cn). This is the official software re…
  ☆10Updated 5 years ago
• tseemann / homebrew-bioinformatics-linux
  Homebrew formulae for bioinformatics software only available for Linux
  ☆27Updated 5 years ago
• bendmorris / taxiphy
  Common repository for scripts to generate trees from taxonomies. Currently includes ITIS, NCBI, and GBIF.
  ☆16Updated 9 years ago
• zorino / kaamer
  kaamer - protein identification based on amino acid kmers
  ☆12Updated 2 years ago
• olgabot / abi2fastq
  abi2fastq is a small utility to convert Sanger sequencing reads in .abi (applied biosystems) format to FASTQ
  ☆11Updated 7 years ago
• douglasgscofield / PacBio-utilities
  Collection of utilities for working with PacBio-based assemblies
  ☆13Updated 2 years ago
• snz20 / carnelian
  ☆11Updated 4 years ago
• phiweger / darkq
  A message queue for genomic surveillance
  ☆20Updated 3 years ago
• MonashBioinformaticsPlatform / bio-ansible
  Proof of concept to use ansible + Lmod to deploy a bioinformatics server
  ☆24Updated 3 weeks ago
• MatthewRalston / kmerdb
  Python CLI for alignment-free genomics.
  ☆12Updated this week
• ababaian / bioFreelancers
  Freelance bioinformaticians directory
  ☆9Updated 2 years ago
• danknights / mwas
  Perform microbiome-wide association studies with a variety of models
  ☆18Updated 8 years ago
• inutano / docker-ngs-tools
  A catalogue of docker images for NGS data analysis tools
  ☆9Updated 5 years ago
• clintval / genome-browser
  A lightweight Python graphing API for genomic features
  ☆15Updated 2 years ago
• sjackman / docker-bio
  Docker images of bioinformatics software
  ☆21Updated 8 years ago
• jbloomlab / alignparse
  Align sequences and then parse features.
  ☆18Updated 2 months ago
• MonashBioinformaticsPlatform / RNAsik-pipe
  RNAsik - more than just a pipeline
  ☆13Updated last year
• bschiffthaler / kogia
  Docker containers for bioinformatics with a small footprint
  ☆23Updated last year
• sourmash-bio / databases
  Build sourmash databases for genbank.
  ☆12Updated 2 years ago
• nf-core / kmermaid
  k-mer similarity analysis pipeline
  ☆21Updated 3 weeks ago
• vinisalazar / BioProv
  A provenance library for bioinformatics workflows 🧬 🔀 📝
  ☆14Updated 3 years ago
• galaxyproject / cargo-port
  cache packages permanently
  ☆14Updated 11 months ago
• luslab / luslab-nf-modules
  Luslab nextflow modules
  ☆14Updated 4 years ago
• koelling / dnacol
  Color DNA/RNA bases in terminal output
  ☆21Updated 7 years ago
• camillescott / shmlast
  blast, shmlast
  ☆22Updated 4 years ago
• evoldoers / wtfgenes
  What's The Function of these genes?
  ☆22Updated 8 years ago
• fulcrumgenomics / nf-dotenv
  Automatically source dotenv files into your Nextflow scope
  ☆9Updated 2 months ago
• aCLImatise / CliHelpParser
  Reads the output from CLI help commands, and generates machine readable schemas (CWL etc)
  ☆14Updated 4 years ago
• angelovangel / faster
  A (very) fast program for getting statistics about a fastq file, the way I need them, written in Rust
  ☆32Updated 5 months ago
• nextflow-io / nf-hack18
  Nextflow workshop 2018 -- Training pages -> https://nextflow-io.github.io/nf-hack18/
  ☆18Updated 6 years ago