bendmorris / taxiphyLinks
Common repository for scripts to generate trees from taxonomies. Currently includes ITIS, NCBI, and GBIF.
☆16Updated 9 years ago
Alternatives and similar repositories for taxiphy
Users that are interested in taxiphy are comparing it to the libraries listed below
Sorting:
- Homebrew formulae for bioinformatics software only available for Linux☆27Updated 6 years ago
- Perform microbiome-wide association studies with a variety of models☆18Updated 8 years ago
- Precursor to SnakeChunks, see https://github.com/SnakeChunks/SnakeChunks. This project has moved and will no longer be edited here.☆11Updated 8 years ago
- Ebola virus surveillance☆15Updated 9 years ago
- Reproducible Phylogenomics☆22Updated 9 years ago
- Visualise interstrain recombination from environmental samples.☆26Updated 6 years ago
- ☆14Updated 5 years ago
- ☆13Updated 8 years ago
- A place to put docker build files☆13Updated 2 years ago
- Color DNA/RNA bases in terminal output☆21Updated 8 years ago
- beRi "beri environments for R installations" is an R environment, R installation, and R package management system for R☆14Updated 6 years ago
- Snakemake skeleton - Build workflows with Snakemake☆19Updated last year
- blast, shmlast☆21Updated 5 years ago
- Collection of utilities for working with PacBio-based assemblies☆13Updated 2 years ago
- Docker images of bioinformatics software☆21Updated 8 years ago
- Virus metagenomic pipeline for unknown host or in absence of a host genome☆18Updated 6 years ago
- Analysis of RNAseq data from (host-associated) microbial mixtures☆12Updated 5 years ago
- Tools for phylogenetic data analysis including visualization and cluster-computing support.☆14Updated 3 years ago
- ☆18Updated 9 years ago
- Browser-based Interactive Phylogeographic Animations☆20Updated 8 years ago
- Biological Graphic tool in Python☆34Updated 5 years ago
- My blog.