MonashBioinformaticsPlatform / RNAsik-pipeLinks
RNAsik - more than just a pipeline
☆13Updated last year
Alternatives and similar repositories for RNAsik-pipe
Users that are interested in RNAsik-pipe are comparing it to the libraries listed below
Sorting:
- Prepare Sailfish and Salmon output for downstream analysis☆42Updated 6 years ago
- Making Snakemake workflows into full-fledged command line tools since 1999.☆51Updated 7 years ago
- Metagenomic profiling and phylogenetic distances via common kmers☆42Updated 4 years ago
- Artisanal 🤣 bioinformatics tools and pipelines in Scala☆20Updated 5 years ago
- What's The Function of these genes?☆22Updated 8 years ago
- Homebrew formulae for bioinformatics software only available for Linux☆27Updated 6 years ago
- Simplify snpEff annotations for interesting cases☆22Updated 6 years ago
- BigWig manpulation tools using libBigWig and htslib☆29Updated last year
- R Interface to the NCBI SRA metadata☆23Updated 7 years ago
- Please see https://github.com/chanzuckerberg/czid-workflows for the latest version of CZ ID workflows.☆27Updated 3 years ago
- Qtip: a tandem simulation approach for accurately predicting read alignment mapping qualities☆25Updated 6 years ago
- ☆18Updated 8 years ago
- Malleable All-seeing Journal Of Research Artifacts☆35Updated 2 years ago
- Visualise interstrain recombination from environmental samples.☆26Updated 6 years ago
- Stupid Simple Structural Variant View☆25Updated 9 years ago
- Parallel merging, squaring off and ensemble calling for genomic variants☆20Updated 6 years ago
- SMBL - SnakeMake Bioinformatics Library. Automatic installation of bioinformatics software in your SnakeMake pipelines.☆23Updated 8 years ago
- Biological Graphic tool in Python☆34Updated 5 years ago
- Accurate read-based metagenome characterization using a hierarchical suite of unique signatures. Please visit our homepage:☆23Updated 6 years ago
- ☆26Updated 5 years ago
- Demonstrating best practices for bioinformatics command line tools☆26Updated 5 years ago
- Please consider using/contributing to https://github.com/nf-core/sarek☆41Updated 4 years ago
- programs and scripts, mainly python, for analyses related to nucleic or protein sequences☆24Updated last month
- Software for detecting transposable element insertions from next-generation sequencing data☆14Updated 4 years ago
- List of computational resources for analyzing microbial sequencing data.☆67Updated 3 weeks ago
- A pipeline for preprocessing NGS data from Illumina, Nanopore and PacBio technologies☆35Updated last year
- prioritize effects of variant annotations from VEP, SnpEff, et al.☆34Updated last year
- Nextflow workshop 2018 -- Training pages -> https://nextflow-io.github.io/nf-hack18/☆19Updated 6 years ago
- Tool for quick offline batch conversion of Genbank IDs or accessions to taxonomy strings☆14Updated last year
- Expectation-Maximization algorithm for Allele-Specific Expression☆21Updated 2 years ago