RNAsik - more than just a pipeline
☆14Feb 6, 2024Updated 2 years ago
Alternatives and similar repositories for RNAsik-pipe
Users that are interested in RNAsik-pipe are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- The open source version of the Melbourne Genomics Health Alliance Exome Sequencing Pipeline☆33Jan 20, 2018Updated 8 years ago
- Northern Arizona SNP Pipeline☆20Oct 29, 2024Updated last year
- A simple variant calling and annotation pipeline using BWA, GATK and ENSEMBL.☆14Nov 29, 2013Updated 12 years ago
- This package implements the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing.☆11Jan 21, 2024Updated 2 years ago
- Printing text using protein structures☆14Aug 9, 2021Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆14Mar 22, 2018Updated 8 years ago
- Tandem Repeats Finder: a program to analyze DNA sequences☆24Jul 30, 2025Updated last year
- ☆11Sep 12, 2026Updated last week
- NGS duplicate marking☆20Apr 6, 2021Updated 5 years ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆43Jul 27, 2026Updated last month
- BigDataScript: Scirpting language for big data☆92Mar 31, 2021Updated 5 years ago
- Grinder is a versatile open-source bioinformatic tool to create simulated omic shotgun and amplicon sequence libraries for all main seque…☆19Aug 30, 2018Updated 8 years ago
- Prokaryotic virus Host Predictor (PHP) is a computational tool for host prediction of prokaryotic viruses based on Gaussian Model (GM). P…☆12Jan 8, 2021Updated 5 years ago
- Summary of a single or multiple MAF files.☆14Feb 5, 2025Updated last year
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Simple R utilities for working with HMMER☆19Oct 3, 2024Updated last year
- Sparse Partial correlation ON Gene Expression - an R package for fast and robust ceRNA network inference☆15Jun 9, 2026Updated 3 months ago
- Prepare Sailfish and Salmon output for downstream analysis☆41Jun 6, 2019Updated 7 years ago
- ASimulatoR: splice-aware RNA-seq data simulation https://doi.org/10.1093/bioinformatics/btab142☆11Sep 6, 2022Updated 4 years ago
- Transcript assembly tool using multiple change-point inference to improve 3'UTR annotation☆13Dec 2, 2022Updated 3 years ago
- RNA editing detection based on machine learning☆10Feb 7, 2018Updated 8 years ago
- Use the action tag @INSTANCETABLE=form_name in a descriptive text field to include a table showing data from repeat instances of that for…☆17Sep 8, 2026Updated last week
- Differential Correlation across Ranked Samples☆13May 31, 2023Updated 3 years ago
- ☆11Jul 6, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- RADAR is devised to detect and visualize all possible twelve-types of RNA editing events from RNA-seq datasets.☆20Sep 2, 2025Updated last year
- misFinder: Identify mis-assemblies in an unbiased manner using reference and paired-end reads☆10Oct 17, 2015Updated 10 years ago
- Copernicus Digital Elevation Models (DEM)☆17Dec 9, 2024Updated last year
- Fast and scalable nanopore adaptive sampling☆37Jun 6, 2023Updated 3 years ago
- Scripts to generate and analyze afdb clusters☆11Sep 15, 2023Updated 3 years ago
- antimicrobial peptide prediction in R☆36Dec 17, 2024Updated last year
- Visualisation and prioritisation of genomic variants from human exome sequencing projects☆13Apr 23, 2019Updated 7 years ago
- Lesson for the shell for genomics☆11Jan 12, 2021Updated 5 years ago
- MetaLogo: a heterogeneity-aware sequence logo generator and aligner☆21Apr 10, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- JAVA framework for accurate SNV assessment☆12Jun 28, 2021Updated 5 years ago
- Zero-inflated mixture model for single-cell data.☆14Feb 16, 2016Updated 10 years ago
- kvector is a small utility for converting motifs to kmer vectors to compare motifs of different lengths☆10May 29, 2017Updated 9 years ago
- Code that powers the giant LED MBTA map on my wall☆13Jun 3, 2018Updated 8 years ago
- A repository containing the materials for a Python workshop a the Library of Congress in May 2019☆12May 23, 2019Updated 7 years ago
- Prediction of the 3D structure of the genome through statistically significant Hi-C contacts.☆21Aug 7, 2018Updated 8 years ago
- 🐻⇔🐨 Calculate distance matrix from ChewBBACA cgMLST allele call tables☆29Jun 12, 2026Updated 3 months ago