MonashBioinformaticsPlatform / RNAsik-pipeLinks
RNAsik - more than just a pipeline
☆13Updated last year
Alternatives and similar repositories for RNAsik-pipe
Users that are interested in RNAsik-pipe are comparing it to the libraries listed below
Sorting:
- Homebrew formulae for bioinformatics software only available for Linux☆27Updated 6 years ago
- Visualise interstrain recombination from environmental samples.☆26Updated 6 years ago
- Making Snakemake workflows into full-fledged command line tools since 1999.☆51Updated 7 years ago
- Qtip: a tandem simulation approach for accurately predicting read alignment mapping qualities☆25Updated 6 years ago
- Prepare Sailfish and Salmon output for downstream analysis☆42Updated 6 years ago
- What's The Function of these genes?☆22Updated 8 years ago
- BigWig manpulation tools using libBigWig and htslib☆29Updated last year
- ☆18Updated 8 years ago
- Metagenomic profiling and phylogenetic distances via common kmers☆42Updated 4 years ago
- R Interface to the NCBI SRA metadata☆23Updated 6 years ago
- Demonstrating best practices for bioinformatics command line tools☆26Updated 5 years ago
- full taxonomer cython repository☆22Updated 5 years ago
- Please see https://github.com/chanzuckerberg/czid-workflows for the latest version of CZ ID workflows.☆27Updated 3 years ago
- Malleable All-seeing Journal Of Research Artifacts☆35Updated 2 years ago
- Artisanal 🤣 bioinformatics tools and pipelines in Scala☆20Updated 5 years ago
- A web based tool to manage and automate the processing of publicly available datasets.☆39Updated 4 years ago
- Tool for quick offline batch conversion of Genbank IDs or accessions to taxonomy strings☆14Updated last year
- Preprocessing paired-end reads produced with experiment-specific protocols☆32Updated 7 years ago
- SMBL - SnakeMake Bioinformatics Library. Automatic installation of bioinformatics software in your SnakeMake pipelines.☆23Updated 8 years ago
- prioritize effects of variant annotations from VEP, SnpEff, et al.☆34Updated 10 months ago
- variant discovery and annotation using GATK and Ensembl☆17Updated 12 years ago
- Color DNA/RNA bases in terminal output☆21Updated 8 years ago
- programs and scripts, mainly python, for analyses related to nucleic or protein sequences☆24Updated 2 months ago
- ⛰ covtobed | Convert the coverage track from a BAM file into a BED file☆44Updated 4 months ago
- Converts Prokka GFF3 files to EMBL files for uploading annotated assemblies to EBI☆29Updated 6 years ago
- A program for fast and accurate genome-guided transcripts reconstruction and quantification from RNA-seq (Supporting Pacbio single-end)☆24Updated 4 years ago
- Accurate, Lightweight Clustering of de novo Transcriptomes using Fragment Equivalence Classes☆31Updated last year
- MicrobeDirectory 2.0☆22Updated 5 years ago
- FAST: Fast Analysis of Sequences Toolbox☆31Updated 6 years ago
- TreeGrafter is a new software tool for annotating uncharacterized protein sequences, using annotated phylogenetic trees.☆12Updated 3 months ago