jianglikun / Metagenome-illumina-sequencing-pipelineLinks
Metagenome sequencing pipeline 宏基因组分析流程
☆11Updated 3 years ago
Alternatives and similar repositories for Metagenome-illumina-sequencing-pipeline
Users that are interested in Metagenome-illumina-sequencing-pipeline are comparing it to the libraries listed below
Sorting:
- ☆14Updated 6 years ago
- Bioinformatics Pipeline☆12Updated 3 years ago
- R package to calculate the Aneuploidy Score from Chromosome Arm-level SCNAs/Aneuploidies (CAAs) as outlined and expanded by Shukla et al.…☆16Updated 4 years ago
- LncmiRSRN: Identifying lncRNA related miRNA sponge regulatory network☆13Updated 3 years ago
- ☆12Updated 7 years ago
- TWAS-pipeline☆24Updated 4 years ago
- Validating glioblastoma immune cell immunohistochemsitry using computational deconvolution of TCGA tumors☆14Updated 6 years ago
- ☆13Updated 4 years ago
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020☆33Updated 4 years ago
- A neoantigen calling pipeline begins from variants record file (MAF) (Not maintain now)☆29Updated 6 years ago
- A pan-cancer genome-wide analysis reveals tumour dependencies by induction of nonsense-mediated decay☆15Updated 5 years ago
- ☆12Updated 2 years ago
- 16S rRNA marker gene upstream and dowstream analysis tutorial for the UCT Hex cluster.☆11Updated 4 years ago
- GCAP (Gene-level Circular Amplicon Prediction) firstly implements extrachromosomal DNA detection from whole-exome-sequencing (WES) data a…☆20Updated 3 months ago
- Pan cancer summary statistics from meta analyses of UK Biobank and Kaiser GERA cohorts.☆17Updated 5 years ago
- This repo contains the code necessary to reproduce the clusters found in "The Immune Landscape of Cancer".☆18Updated 6 years ago
- ☆18Updated 2 years ago
- Openbiox 翻译小组发起并维护的优秀 Workflow 翻译项目☆27Updated 5 years ago
- Prostate Cancer Alteration Signature Analysis https://xsliulab.github.io/PC_CNA_signature/☆13Updated 4 years ago
- ☆29Updated 6 years ago
- ☆13Updated 4 years ago
- ☆18Updated 6 years ago
- MicrOSAtellite Instability Classifier☆15Updated 8 years ago
- R package☆21Updated 2 years ago
- Scripts for plotting figures and running analysis throughout the manuscript☆11Updated 4 years ago
- From IDAT to beta.☆25Updated 7 years ago
- Machine learning algorithm to predict biological pathway relationships based on functional genomics networks☆20Updated 7 years ago
- Code for the paper on the ICR immune signatures and prognostic significance pan-cancer (TCGA)☆10Updated 5 years ago
- Integrating LASSO and bootstrapping algorithm to find best prognostic or predictive biomarkers☆21Updated 3 years ago
- Kidney Epigenome and Transcriptome-based multi-stage Prioritization☆17Updated 3 years ago