ZhikunWu / Bioinformatic-resourcesView external linksLinks
☆20Oct 10, 2020Updated 5 years ago
Alternatives and similar repositories for Bioinformatic-resources
Users that are interested in Bioinformatic-resources are comparing it to the libraries listed below
Sorting:
- ☆12Jun 12, 2023Updated 2 years ago
- Common scripts☆15Updated this week
- Work from the book 'Advanced Python for Biologists'☆12Sep 12, 2018Updated 7 years ago
- ☆11Sep 1, 2022Updated 3 years ago
- Dinoflagellate Annotation Workflow☆15Oct 3, 2022Updated 3 years ago
- De novo lncRNA discovery pipeline, re-write of PLAR in shell and awk☆10Aug 2, 2023Updated 2 years ago
- ☆11Sep 28, 2021Updated 4 years ago
- ☆11Dec 15, 2025Updated 2 months ago
- Readme☆10Mar 15, 2020Updated 5 years ago
- Codes for Vmap1.1 and Vmap3☆11Jan 5, 2026Updated last month
- A genome annotation pipeline that use short and long sequencing reads alignments from animal genomes☆30Apr 10, 2024Updated last year
- I often use some of the self-written programs.☆16Nov 13, 2025Updated 3 months ago
- Long Read Based SV Calling Tools Analysis☆14Mar 22, 2024Updated last year
- Cookiecutter for snakemake slurm profile☆15Jul 22, 2023Updated 2 years ago
- Set of script for the paper on the cattle graph genome☆13Jan 10, 2023Updated 3 years ago
- ☆18May 27, 2022Updated 3 years ago
- Customized codes used in Tibetan wheat sequencing project.☆13Oct 18, 2022Updated 3 years ago
- Process linked-read data, from raw sequences to phased haplotypes, batteries included. Works with WGS too!☆18Feb 6, 2026Updated last week
- A tool to visualize the haplotype pattern and various information in excel.☆24Mar 5, 2025Updated 11 months ago
- ☆18Oct 4, 2023Updated 2 years ago
- Repository for the 2017 Genome Biology publication, "The interplay of demography and selection during maize domestication and expansion"☆17Nov 24, 2020Updated 5 years ago
- ☆17Oct 31, 2025Updated 3 months ago
- Code for assembly approach presented in "Haplotype-resolved assembly of a tetraploid potato genome using long reads and low-depth offspri…☆14Nov 20, 2023Updated 2 years ago
- ☆18Apr 18, 2024Updated last year
- Bioinformatics scripts for genome analysis☆17Oct 26, 2022Updated 3 years ago
- Miscellaneous R script to wrangle data and generate visualizations☆17Aug 14, 2024Updated last year
- Main scripts and commands used to analyze goat population genetic and domestication☆19Mar 25, 2019Updated 6 years ago
- Small and simple scripts useful for various bioinformatics purposes e.g. extract sequences from fasta files, rename fasta files (prefix a…☆22Oct 21, 2025Updated 3 months ago
- A python package for the identification of lncRNA from the assembled novel transcripts☆17Oct 28, 2021Updated 4 years ago
- Pipelines for NGS data preprocessing by the Bock lab and friends☆22Aug 29, 2022Updated 3 years ago
- ☆23Jul 29, 2025Updated 6 months ago
- Here, we de novo assembled 110 representative Setaria accessions from a worldwide collected 1,844 variteies, and performed pan-/graph- ge…☆28Sep 13, 2023Updated 2 years ago
- Code for Article "A pan-genome of 69 Arabidopsis thaliana accessions reveals a conserved genome structure throughout the global species r…☆23Jun 14, 2024Updated last year
- Python Scripts for Bioinformatics☆15Apr 24, 2024Updated last year
- Structure variants calling and genotyping scripts for pan-Zea☆22Nov 17, 2022Updated 3 years ago
- ☆10Feb 25, 2024Updated last year
- Bulk RNA-seq Data Processing, Quality Control, and Downstream Analysis Pipeline☆21Jan 30, 2026Updated 2 weeks ago
- This is a workflow that combines multiple software, mainly for whole genome annotation of eukaryotes.☆29Jan 17, 2024Updated 2 years ago
- Scripts to handle NGS data and other biological data☆22Jan 24, 2024Updated 2 years ago