haesleinhuepf / I2K2022-napari-workshop
☆16Updated 2 years ago
Alternatives and similar repositories for I2K2022-napari-workshop:
Users that are interested in I2K2022-napari-workshop are comparing it to the libraries listed below
- ☆21Updated last year
- ☆23Updated 6 months ago
- python tools for BigDataViewer☆22Updated 2 months ago
- ☆17Updated 2 years ago
- Optimize image processing workflows in napari☆17Updated 2 years ago
- ☆12Updated 7 months ago
- A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…☆21Updated last week
- Accelerated Pixel and Object Classifiers (APOC)☆55Updated last month
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆35Updated 7 months ago
- Process images using SimpleITK in napari☆20Updated 5 months ago
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆15Updated last week
- ilastik plugin for napari☆14Updated 11 months ago
- ☆20Updated last year
- A 3D interactivity toolbox for napari☆33Updated 3 months ago
- The repository of NEUBIAS textbook 2021☆10Updated 3 years ago
- Visualizing feature measurements on label images in napari☆10Updated 7 months ago
- A plugin that enables image segmentation provided by Allen Institute for Cell Science☆16Updated last year
- Linking napari layers with Matplotlib plots☆40Updated this week
- some useful function to get Label from ROIs and vice versa , and more!☆12Updated last year
- Process and analyze surfaces using vedo in napari.☆23Updated 10 months ago
- A napari plugin for zarr backed OME-NGFF images☆32Updated this week
- 1d plotting in napari-based canvas.☆26Updated this week
- A napari plugin to load & deskew folders of lattice light sheet TIFFs☆12Updated 2 weeks ago
- Use Napari Viewer to display CZI images☆11Updated 2 years ago
- A napari plugin for clustering objects according to their properties.☆82Updated last week
- Gamified image segmentation quality estimation☆17Updated 2 years ago
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆43Updated last year
- A place to collect information used in lectures, demos, workshops, etc.☆17Updated 5 months ago
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆26Updated 4 months ago
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆20Updated 3 months ago