☆23Mar 26, 2021Updated 5 years ago
Alternatives and similar repositories for napari_demo
Users that are interested in napari_demo are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Create movies from series of key-frames in napari.☆38May 24, 2021Updated 4 years ago
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆34Aug 22, 2024Updated last year
- A JupyterBook site for napari workshop materials☆10Jul 11, 2022Updated 3 years ago
- ilastik plugin for napari☆15Mar 2, 2026Updated 3 weeks ago
- Guides and code for 3D nuclear instance segmentation☆23Dec 2, 2025Updated 3 months ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A napari plugin to load & deskew folders of lattice light sheet TIFFs☆13Jan 5, 2026Updated 2 months ago
- Paint segmentations directly to on-disk/remote zarr arrays☆15Jun 26, 2024Updated last year
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆17Mar 4, 2026Updated 3 weeks ago
- Fusing image tiles with dask array's map_blocks☆31Feb 27, 2024Updated 2 years ago
- Python image segmentation plugin☆31Jan 13, 2021Updated 5 years ago
- Archived: control, reconstruction, and analysis code for oblique plane microscopy.☆22Apr 1, 2025Updated 11 months ago
- A minimalistic napari plugin to create and save regions of interest and annotations on series of images☆18Apr 8, 2025Updated 11 months ago
- dask empowered fast4dreg☆15Mar 11, 2026Updated 2 weeks ago
- Deep Learning segmentation suite designed for 2D microscopy image segmentation☆10Dec 17, 2021Updated 4 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Running ImJoy plugins in Jupyter notebooks☆11Jan 10, 2023Updated 3 years ago
- EXPERIMENTAL repository for exploring Ops approaches, algorithms, etc.☆19Jun 14, 2022Updated 3 years ago
- Dataset EXploration & Processing☆33May 11, 2023Updated 2 years ago
- Accelerated Pixel and Object Classifiers (APOC)☆61Jul 18, 2025Updated 8 months ago
- Python package for writing 5D numpy arrays to HDF5 files readable by both Imaris and BigDataViewer☆12Aug 13, 2021Updated 4 years ago
- ZetaStitcher is a tool designed to stitch large volumetric images such as those produced by Light-Sheet Fluorescence Microscopes.☆46Nov 13, 2025Updated 4 months ago
- GPU accelerated 3D image deconvolution using CUDA☆39Jul 18, 2024Updated last year
- SLM binary mask generator for Lattice Light Sheet microscopy☆12Dec 2, 2021Updated 4 years ago
- ☆21Mar 11, 2026Updated 2 weeks ago
- NordVPN Threat Protection Pro™ • AdTake your cybersecurity to the next level. Block phishing, malware, trackers, and ads. Lightweight app that works with all browsers.
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆72Mar 2, 2026Updated 3 weeks ago
- GPU accelerated image/volume processing in Python☆113Feb 10, 2026Updated last month
- Basic example of using OME-Zarr in a Nextflow pipeline☆21Jul 15, 2025Updated 8 months ago
- Nanoscopy library for Python (NanoPyx, the successor to NanoJ) - focused on light microscopy and super-resolution imaging☆90Mar 3, 2026Updated 3 weeks ago
- Speed up coding/extending image analysis in Python.☆37Jan 20, 2026Updated 2 months ago
- Python program to generate NetworkX graphs from segmented images.☆14Apr 14, 2023Updated 2 years ago
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆21Mar 12, 2026Updated 2 weeks ago
- A short course exploring several fun and useful notebooks and Napari widgets for deep learning with SAM, Cellpose, Stardist and friends.☆19Dec 9, 2025Updated 3 months ago
- A napari plugin for making animations☆95Feb 1, 2026Updated last month
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.☆55Nov 13, 2025Updated 4 months ago
- Tools for handling FIB-SEM data and annotations☆22Apr 4, 2025Updated 11 months ago
- GPU accelerated volume rendering / processing in Python☆120Mar 21, 2019Updated 7 years ago
- 3D Structured illumination microscopy (3D-SIM) reconstruction software☆32Oct 2, 2024Updated last year
- TensorFlow Deconvolution for Microscopy Data☆91Apr 29, 2022Updated 3 years ago
- SciCount is tool focused on counting and classifying of objects in image-like data and scientific images, with training and example datas…☆11Oct 24, 2023Updated 2 years ago
- ☆14Feb 24, 2026Updated last month