AllenInstitute / aics-ml-segmentationLinks
AICS ML Segmentation (One-Way) Mirror
☆27Updated 4 years ago
Alternatives and similar repositories for aics-ml-segmentation
Users that are interested in aics-ml-segmentation are comparing it to the libraries listed below
Sorting:
- AICS Segmentation (One-Way) Mirror☆45Updated 4 years ago
- ☆25Updated 4 years ago
- ☆32Updated 2 years ago
- Part 1 of Allen Cell and Structure Segmenter: classic image segmentation workflow☆26Updated 11 months ago
- simple package for augmentation of n-dimensional arrays☆32Updated last year
- Easily read and write ome-tiff images in python☆27Updated last year
- The repository of NEUBIAS textbook 2021☆11Updated 3 years ago
- Cell tracking using TensorFlow and BayesianTracker☆22Updated 3 years ago
- Lazily load multiscale whole-slide images with openslide and dask☆33Updated 2 years ago
- Cloud-based data annotation tools for biological images☆81Updated last year
- Detect morphological motifs, such as blebs, filopodia, and lamellipodia, from 3D images of surfaces, particularly images of cell surfaces…☆29Updated 2 months ago
- Supporting data files, documentation, and updated tips for the Cell Painting protocol☆21Updated 3 years ago
- SplineDist: Automated Cell Segmentation with Spline Curves☆67Updated 8 months ago
- Accelerated Pixel and Object Classifiers (APOC)☆56Updated 4 months ago
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆52Updated 8 months ago
- Notebooks for VoidSeg☆16Updated 5 years ago
- ☆12Updated 4 years ago
- Process images using SimpleITK in napari☆21Updated last month
- This repository contains the codes to run the nuclei segmentation pipeline of the BIOMAG group inspired by Kaggle's Data Science Bowl 201…☆54Updated 4 years ago
- imaging demos☆9Updated 2 years ago
- Cell tracker designed for tracking intestinal organoids☆22Updated last week
- EASI-FISH analysis pipeline for spatial transcriptomics☆35Updated 7 months ago
- Learn morphological states of dynamic cells☆12Updated 2 years ago
- ☆36Updated 3 weeks ago
- MorphoFeatures code and data☆21Updated 2 years ago
- Track and lineage visualization with btrack and Napari☆45Updated 8 months ago
- Piecewise alignment for layers of mosaics☆25Updated last month
- Analysis of results of the Data Science Bowl 2018☆21Updated 5 years ago
- ☆18Updated 2 years ago
- Visualizing feature measurements on label images in napari☆10Updated 11 months ago