AllenInstitute / aics-ml-segmentationLinks
AICS ML Segmentation (One-Way) Mirror
☆27Updated 4 years ago
Alternatives and similar repositories for aics-ml-segmentation
Users that are interested in aics-ml-segmentation are comparing it to the libraries listed below
Sorting:
- AICS Segmentation (One-Way) Mirror☆45Updated 4 years ago
- ☆25Updated 5 years ago
- ☆32Updated last month
- This repository contains the codes to run the nuclei segmentation pipeline of the BIOMAG group inspired by Kaggle's Data Science Bowl 201…☆55Updated 5 years ago
- Cloud-based data annotation tools for biological images☆81Updated last year
- SplineDist: Automated Cell Segmentation with Spline Curves☆68Updated 11 months ago
- Cell tracker designed for tracking intestinal organoids☆26Updated this week
- Jupyter notebooks for CellProfiler and friends☆14Updated 7 years ago
- Cell tracking using TensorFlow and BayesianTracker☆22Updated 3 years ago
- The repository of NEUBIAS textbook 2021☆11Updated 3 years ago
- Microscopy Image Cytometry Toolkit☆116Updated 3 years ago
- Easily read and write ome-tiff images in python☆27Updated last year
- Self-supervised models for encoding protein localization patterns from microscopy images☆77Updated last month
- Piecewise alignment for layers of mosaics☆29Updated 2 weeks ago
- ☆12Updated 4 years ago
- ☆23Updated 2 years ago
- A browser-based deep learning tool for image annotation, segmentation, classification, and measurement.☆35Updated 2 weeks ago
- QuPath extension for Cellsparse☆19Updated 4 months ago
- Supporting data files, documentation, and updated tips for the Cell Painting protocol☆22Updated 3 years ago
- Accelerated Pixel and Object Classifiers (APOC)☆56Updated 2 months ago
- Notebooks for VoidSeg☆17Updated 5 years ago
- simple package for augmentation of n-dimensional arrays☆33Updated 2 years ago
- Lazily load multiscale whole-slide images with openslide and dask☆33Updated 2 years ago
- NEUBIAS Academy @Home: Interactive Bioimage Analysis with Python and Jupyter☆63Updated 2 years ago
- Analysis of results of the Data Science Bowl 2018☆22Updated 5 years ago
- Python package to export tensorflow models as DeepImageJ bundled models☆17Updated 3 years ago
- Track and lineage visualization with btrack and Napari☆45Updated 10 months ago
- Community-contributed and experimental CellProfiler modules.☆67Updated this week
- ☆39Updated 3 weeks ago
- A self-explanatory, hands-on intro to bioimage analysis in python. Slightly outdated but still much liked by learners.☆98Updated 2 years ago