Alternatives and similar repositories for 3DCT

Users that are interested in 3DCT are comparing it to the libraries listed below

• tlambert03 / llspy-slm
  SLM binary mask generator for Lattice Light Sheet microscopy
  ☆12Updated 4 years ago
• alisterburt / napari-mrcfile-reader
  Read MRC format image files into napari using the mrcfile package from CCP-EM
  ☆19Updated last year
• cmongis / psfj
  PSFj - Know your microscope fluorescence
  ☆23Updated 5 years ago
• royerlab / daxi
  High-Resolution, Large Field-of-View, and Multi-ViewSingle Objective Light-Sheet Microscopy
  ☆29Updated last year
• DeMarcoLab / autolamella
  autolamella is a python package for automated cryo-lamella preparation with focused ion beam milling.
  ☆19Updated 5 months ago
• ImSwitch / ImSwitch
  ImSwitch is a software solution in Python that aims at generalizing microscope control by providing a solution for flexible control of mu…
  ☆82Updated last month
• hanjinliu / magic-class
  Generate multifunctional and macro recordable GUIs from Python classes
  ☆44Updated last month
• brisvag / napari-label-interpolator
  ☆13Updated last year
• AndrewGYork / high_na_single_objective_lightsheet
  Parts list and build instructions for our high-numerical-aperture lightsheet. Read the publication here: https://andrewgyork.github.io/hi…
  ☆22Updated last year
• tlambert03 / LLSpy
  Lattice light-sheet post-processing utility.
  ☆30Updated last week
• PRNicovich / 3D-Printed-Optics-Lab-Parts
  Various parts made for fluorescence microscopy + optics work
  ☆16Updated 6 years ago
• mesoSPIM / mesoSPIM-control
  Image acquisition software for mesoSPIM light-sheet microscopes.
  ☆44Updated this week
• python-microscope / microscope
  Python library for control of microscope devices, supporting hardware triggers and distribution of devices over the network for performan…
  ☆81Updated 5 months ago
• hanjinliu / impy
  Speed up coding/extending image analysis in Python.
  ☆35Updated last month
• bionanopatterning / pyGPUreg
  ☆23Updated last year
• COBA-NIH / MicroscopyForBeginnersReferenceGuide
  A Beginner's guide to microscopy, from sample prep to acquisition, image analysis, and data interpretation
  ☆29Updated last month
• napari-threedee / napari-threedee
  A 3D interactivity toolbox for napari
  ☆37Updated 6 months ago
• tlambert03 / imarispy
  Python package for writing 5D numpy arrays to HDF5 files readable by both Imaris and BigDataViewer
  ☆12Updated 4 years ago
• Ajaxels / MIB2
  Microscopy Image Browser version 2 is a package for image processing, segmentation and visualization of multi-dimensional (2D-4D) microsc…
  ☆36Updated 3 months ago
• scopetools / cudadecon
  GPU accelerated 3D image deconvolution using CUDA
  ☆39Updated last year
• sklumpe / SerialFIB
  A Modular Platform for Streamlining Automated Cryo-FIB Workflows
  ☆25Updated 10 months ago
• BioimageAnalysisCoreWEHI / napari_lattice
  Napari plugin for custom analysis and visualization of lattice lightsheet and Oblique Plane Microscopy data. The plugin is optimized for …
  ☆14Updated 3 weeks ago
• jdeschamps / EMU
  A Micro-Manager plugin that loads easily reconfigurable user interfaces.
  ☆11Updated 2 years ago
• jacopoabramo / napari-live-recording
  General-purpouse camera capture plugin for data streaming to napari
  ☆26Updated last year
• saalfeldlab / n5-ij
  ImageJ convenience layer for N5
  ☆19Updated last month
• juglab / cryoCARE_T2T
  Singularity image for cryo-CARE
  ☆37Updated 4 years ago
• PreibischLab / multiview-simulation
  Code for simulating a multi-view acquisition including attenuation, convolution, reduced sampling and poission noise
  ☆12Updated 3 years ago
• tlambert03 / pycudadecon
  Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy
  ☆71Updated last week
• aherbert / gdsc-smlm
  GDSC Single Molecule Light Microscopy ImageJ Plugins
  ☆17Updated this week
• david-hoffman / pydecon
  Image deconvolution algorithms in python
  ☆23Updated 3 years ago