Alternatives and similar repositories for 3DCT

Users that are interested in 3DCT are comparing it to the libraries listed below

• cmongis / psfj
  PSFj - Know your microscope fluorescence
  ☆21Updated 5 years ago
• brisvag / napari-label-interpolator
  ☆12Updated last year
• hanjinliu / napari-filaments
  A napari plugin for filament analysis
  ☆9Updated last year
• PRNicovich / 3D-Printed-Optics-Lab-Parts
  Various parts made for fluorescence microscopy + optics work
  ☆16Updated 5 years ago
• alisterburt / napari-mrcfile-reader
  Read MRC format image files into napari using the mrcfile package from CCP-EM
  ☆18Updated last year
• Ajaxels / MIB2
  Microscopy Image Browser version 2 is a package for image processing, segmentation and visualization of multi-dimensional (2D-4D) microsc…
  ☆32Updated 3 weeks ago
• bionanopatterning / pyGPUreg
  ☆22Updated 8 months ago
• DeMarcoLab / autolamella
  autolamella is a python package for automated cryo-lamella preparation with focused ion beam milling.
  ☆19Updated this week
• constantinpape / pybdv
  python tools for BigDataViewer
  ☆22Updated 5 months ago
• bionanopatterning / scNodes
  ☆14Updated 4 months ago
• bobpepin / YacuDecu
  GPU Deconvolution Library with C and Matlab API for nVidia GPUs
  ☆21Updated 6 years ago
• tlambert03 / llspy-slm
  SLM binary mask generator for Lattice Light Sheet microscopy
  ☆12Updated 3 years ago
• jdeschamps / EMU
  A Micro-Manager plugin that loads easily reconfigurable user interfaces.
  ☆11Updated last year
• juglab / cryoCARE_T2T
  Singularity image for cryo-CARE
  ☆33Updated 3 years ago
• GrotjahnLab / surface_morphometrics
  Morphometrics for Membrane Surfaces Segmented from Cryo-ET or other volumetric imaging.
  ☆24Updated this week
• rosalindfranklininstitute / RedLionfish
  ☆29Updated last year
• saalfeldlab / n5-ij
  ImageJ convenience layer for N5
  ☆17Updated 2 weeks ago
• nvladimus / npy2bdv
  Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.
  ☆35Updated 10 months ago
• tlambert03 / LLSpy
  Lattice light-sheet post-processing utility.
  ☆29Updated 3 weeks ago
• aherbert / gdsc-smlm
  GDSC Single Molecule Light Microscopy ImageJ Plugins
  ☆16Updated last week
• clij / clijpy
  GPU-accelerated image processing using CLIJ via pyimagej in python
  ☆10Updated 4 years ago
• morphometrics / morphometrics
  ☆21Updated last year
• napari-storm / napari-storm
  ☆12Updated 7 months ago
• sklumpe / SerialFIB
  A Modular Platform for Streamlining Automated Cryo-FIB Workflows
  ☆24Updated 3 months ago
• sverger / SurfCut
  Fiji macro for cutting confocal stacks at various depths relative to surface signal
  ☆10Updated 4 years ago
• cellcanvas / surforama
  a tool for using surfaces to explore volumetric data in napari
  ☆18Updated last month
• haesleinhuepf / napari-simpleitk-image-processing
  Process images using SimpleITK in napari
  ☆21Updated last month
• BioimageAnalysisCoreWEHI / napari_lattice
  Napari plugin for custom analysis and visualization of lattice lightsheet and Oblique Plane Microscopy data. The plugin is optimized for …
  ☆13Updated last month
• scopetools / cudasirecon
  3D Structured illumination microscopy (3D-SIM) reconstruction software
  ☆31Updated 8 months ago
• matplotlib / napari-matplotlib
  Linking napari layers with Matplotlib plots
  ☆40Updated last month