coraxx / 3DCT
This Toolbox is build for 3D correlative microscopy. It helps with 3D to 2D correlation of three dimensional confocal image stacks to two dimensional SEM/FIB dual beam microscope images.
☆11Updated 4 years ago
Alternatives and similar repositories for 3DCT:
Users that are interested in 3DCT are comparing it to the libraries listed below
- Microscopy Image Browser version 2 is a package for image processing, segmentation and visualization of multi-dimensional (2D-4D) microsc…☆29Updated 3 weeks ago
- PSFj - Know your microscope fluorescence☆21Updated 4 years ago
- Lattice light-sheet post-processing utility.☆27Updated 3 weeks ago
- 3D quantitative label-free imaging with phase and polarization☆15Updated this week
- GPU accelerated 3D image deconvolution using CUDA☆34Updated 6 months ago
- Software for the reconstruction of multi-view microscopic acquisitions like Selective Plane Illumination Microscopy (SPIM) Data☆24Updated this week
- ☆11Updated last year
- 3D Structured illumination microscopy (3D-SIM) reconstruction software☆30Updated 3 months ago
- Open-source, GPU accelerated code for deskewing and deconvolving lattice light sheet data☆25Updated 4 years ago
- Various parts made for fluorescence microscopy + optics work☆16Updated 5 years ago
- SLM binary mask generator for Lattice Light Sheet microscopy☆12Updated 3 years ago
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆35Updated 5 months ago
- Fast and Accurate 3D PSF Computation for Fluorescence Microscopy☆39Updated 3 months ago
- Python package for writing 5D numpy arrays to HDF5 files readable by both Imaris and BigDataViewer☆12Updated 3 years ago
- Code for simulating a multi-view acquisition including attenuation, convolution, reduced sampling and poission noise☆12Updated 2 years ago
- A Micro-Manager plugin that loads easily reconfigurable user interfaces.☆11Updated last year
- Image deconvolution algorithms in python☆20Updated 2 years ago
- python tools for BigDataViewer☆21Updated last month
- Noise Correction Algorithm for sCMOS cameras☆29Updated 5 years ago
- GPU-accelerated image processing using CLIJ via pyimagej in python☆10Updated 4 years ago
- High-Resolution, Large Field-of-View, and Multi-ViewSingle Objective Light-Sheet Microscopy☆27Updated 4 months ago
- GPU Deconvolution Library with C and Matlab API for nVidia GPUs☆21Updated 5 years ago
- Control, reconstruction, and analysis code for oblique plane microscopy.☆22Updated this week
- ☆22Updated this week
- Little OBjects Segmentation and Tracking EnviRonment☆9Updated 4 years ago
- widget for PSF simulation with aberrations☆26Updated last year
- Dataset EXploration & Processing☆31Updated last year
- ☆21Updated 3 years ago
- ☆29Updated 10 months ago