Alternatives and similar repositories for imarispy

Users that are interested in imarispy are comparing it to the libraries listed below

• constantinpape / pybdv
  python tools for BigDataViewer
  ☆22Updated last year
• multiview-stitcher / napari-stitcher
  A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher
  ☆17Updated 6 months ago
• nvladimus / npy2bdv
  Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.
  ☆34Updated last year
• m-albert / MVRegFus
  Python module for registering and fusing multi-view microscopy data
  ☆24Updated 10 months ago
• BIOP / ijp-LaRoMe
  some useful function to get Label from ROIs and vice versa , and more!
  ☆11Updated 2 years ago
• aeisenbarth / ngff-writer
  A writer and reader for NGFF OME-Zarr datasets
  ☆14Updated 4 years ago
• saalfeldlab / n5-ij
  ImageJ convenience layer for N5
  ☆19Updated 2 months ago
• jluethi / napari-feature-visualization
  Visualizing feature measurements on label images in napari
  ☆10Updated last year
• tlambert03 / napari-ndtiffs
  A napari plugin to load & deskew folders of lattice light sheet TIFFs
  ☆13Updated 2 weeks ago
• Euro-BioImaging / BatchConvert
  A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…
  ☆25Updated 10 months ago
• miura / NEUBIAS_AnalystSchool2020
  ☆13Updated 5 years ago
• chanzuckerberg / napari-plugin-alfa-cohort
  Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration
  ☆11Updated 4 years ago
• flevet / SR-Tesseler
  ☆13Updated 5 years ago
• Kapoorlabs-CAPED / NapaTrackMater
  Napari Visualization tool for Trackmate > 6.0 XML files for 2/3D + time tracks. Available via pip package napatrackmater.
  ☆18Updated 3 months ago
• cmongis / psfj
  PSFj - Know your microscope fluorescence
  ☆23Updated 5 years ago
• tlambert03 / pycudadecon
  Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy
  ☆71Updated last week
• morphometrics / morphometrics
  ☆22Updated 2 years ago
• QI2lab / OPM
  Archived: control, reconstruction, and analysis code for oblique plane microscopy.
  ☆22Updated 9 months ago
• BIOP / EasyXT-FIJI
  Commands and Classes for interfacing between Imaris and Fiji
  ☆13Updated last year
• bigdataprocessor / bigdataprocessor2
  ☆24Updated 4 months ago
• haesleinhuepf / napari-process-points-and-surfaces
  Process and analyze surfaces using vedo in napari.
  ☆25Updated last year
• guiwitz / napari_demo
  ☆23Updated 4 years ago
• krentzd / napari-clemreg
  An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)
  ☆20Updated 2 months ago
• hinderling / napari_pixel_classifier
  An Ilastik-like interactive pixel classifier.
  ☆16Updated last year
• mobie / mobie
  MultiModal Big Image Data Sharing and Exploration
  ☆18Updated 3 years ago
• ilastik / ilastik-napari
  ilastik plugin for napari
  ☆14Updated last month
• haesleinhuepf / napari-simpleitk-image-processing
  Process images using SimpleITK in napari
  ☆23Updated 8 months ago
• allen-cell-animated / agave
  High quality visualization for volumetric image data
  ☆54Updated last week
• mobie / mobie-viewer-fiji
  ☆41Updated 3 weeks ago
• haesleinhuepf / napari-plot-profile
  ☆20Updated 8 months ago