mcib3d / mcib3d-coreLinks
mcib3d core library for 3D ImageJ suite
☆14Updated 2 years ago
Alternatives and similar repositories for mcib3d-core
Users that are interested in mcib3d-core are comparing it to the libraries listed below
Sorting:
- ☆13Updated 5 years ago
- some useful function to get Label from ROIs and vice versa , and more!☆12Updated 2 years ago
- Generate markdown notebooks from ImageJ Macro☆26Updated 4 years ago
- Napari Visualization tool for Trackmate > 6.0 XML files for 2/3D + time tracks. Available via pip package napatrackmater.☆17Updated last month
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆26Updated 7 months ago
- Resources for teaching/preparing to teach bioimage analysis☆58Updated last week
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆30Updated this week
- ☆13Updated 5 years ago
- Icons describing multiple microscopy techniques, as used by https://www.epfl.ch/research/facilities/ptbiop/equipment/☆11Updated 2 years ago
- Process and analyze surfaces using vedo in napari.☆24Updated last year
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆40Updated 4 months ago
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆28Updated 4 months ago
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆18Updated 4 months ago
- ImgLib2/BDV implementation of Stitching for large datasets☆74Updated last month
- ☆11Updated last week
- Feature extraction for labeled objects in images using regionprops from scikit-image☆51Updated 4 months ago
- Accelerated Pixel and Object Classifiers (APOC)☆56Updated 2 months ago
- ☆32Updated last year
- ☆51Updated 4 months ago
- A collection of demonstration materials for MorphoLibJ.☆12Updated 2 years ago
- Running compute-intense parts of BigStitcher distributed☆26Updated last week
- Track and lineage visualization with btrack and Napari☆45Updated 10 months ago
- The known BioVoxxel Toolbox functions now improved for 2D and 3D images☆17Updated 2 months ago
- This repository contains the materials for the University of Oxford DTC ONBI Image Analysis course☆18Updated 7 years ago
- StarDist plugin for ImageJ☆30Updated 3 years ago
- Browse your OMERO database from within napari.☆38Updated 2 weeks ago
- A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification☆23Updated 4 years ago
- Particle tracking by solving linear assignment problem.☆57Updated 2 weeks ago
- A first intoduction to scripting in Fiji using the ImageJ Macro language.☆26Updated 11 months ago
- MultiModal Big Image Data Sharing and Exploration☆17Updated 2 years ago