Stray has been renamed fido, development continues at jsilve24/fido
☆23Jan 26, 2022Updated 4 years ago
Alternatives and similar repositories for stray
Users that are interested in stray are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆10Aug 31, 2018Updated 8 years ago
- Bayesian multiple logistic regression for GWAS meta-analysis☆17Aug 20, 2025Updated last year
- Metabolic modeling tutorial for EMBO practical course: Metabolite and species dynamics in microbial communities 2022☆13Jan 8, 2024Updated 2 years ago
- A pipeline for extracting SSU rRNA gene from wgs data and applying them for further diversity analysis☆10Jan 30, 2016Updated 10 years ago
- ☆11Feb 21, 2020Updated 6 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Code for effectively dealing with running CmdStan... from R.... because reasons...☆13Jun 17, 2022Updated 4 years ago
- A manuscript exploring the effects of taxonomic bias on microbiome differential-abundance analysis.☆12Oct 30, 2023Updated 3 years ago
- qiime2 plugin for aldex2 for differential abundance analysis☆11Mar 5, 2020Updated 6 years ago
- Programs and documentation for the SAMSA pipeline, version 1.0☆16Dec 16, 2019Updated 6 years ago
- Bayesian Poisson Tensor Factorization (For Dummies)☆11Dec 28, 2018Updated 7 years ago
- SHallow shOtGUN profiler☆51Mar 4, 2022Updated 4 years ago
- Vanilla regression methods for microbiome differential abundance analysis☆61Nov 3, 2020Updated 5 years ago
- MIMIX: a Bayesian Mixed-Effects Model for Microbiome Data from Designed Experiments☆11Jul 9, 2020Updated 6 years ago
- ☆18Aug 5, 2022Updated 4 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Reaction Analysis through Imaging of Chemical Units☆17Dec 5, 2025Updated 10 months ago
- COVID-19 ILI forecasting for the U.S.☆16May 20, 2020Updated 6 years ago
- R package for microbiome analysis. Provides helper functions for common workflows ranging from preprocessing to visualization.☆24Jan 24, 2024Updated 2 years ago
- DEPRECATED: Store and query public TCGA data☆11Sep 15, 2016Updated 10 years ago
- A multi-threaded C++ implementation of Nickel & Kiela's "Poincare Embeddings" paper from NIPS 2017, following the implementation of the a…☆18Jun 6, 2018Updated 8 years ago
- Visualise the Results of Inferential Statistics using 'ggplot2'☆13Jun 12, 2023Updated 3 years ago
- Mapping in R workshop demonstrating how to use R/ RStudio to work with spatial data for mapping and visualization.☆11Dec 2, 2021Updated 4 years ago
- Accurate and robust inference of microbial growth dynamics from metagenomic sequencing☆21May 11, 2022Updated 4 years ago
- Implements the model described in "Identification, Interpretability, and Bayesian Word Embeddings"☆19Jun 5, 2019Updated 7 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Files for lawcite biblatex style☆10Apr 17, 2023Updated 3 years ago
- Count Regression for Correlated Observations with the Beta-binomial☆107Nov 13, 2025Updated 11 months ago
- ☆19Mar 8, 2026Updated 7 months ago
- A paper about causal inference with Bayesian modeling☆15Jan 21, 2020Updated 6 years ago
- ☆18Updated this week
- BinaRena: Interactive Visualization and Binning of Metagenomic Contigs☆33Aug 22, 2024Updated 2 years ago
- ✅ PeopleBudget is an open-source tool for hosting participatory budgets elections at the local level.☆10Oct 4, 2022Updated 4 years ago
- Material for my proposed StanCon talk☆20Oct 15, 2020Updated 6 years ago
- ☆23Apr 3, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- StriDe Assembler☆25Nov 23, 2017Updated 8 years ago
- Turn images into georeferenced rasters for mapping in R.☆15Updated this week
- Visualize differentially ranked features (taxa, metabolites, ...) and their log-ratios across samples☆35Apr 4, 2025Updated last year
- Repository of all Civil Asset Forfeiture documents obtained by LPL☆12Jun 15, 2017Updated 9 years ago
- Annotation of Metabolite Origin via Networks: A tool for predicting putative metabolite origins for microbes or between microbes and host…☆27Aug 20, 2026Updated 2 months ago
- ALDEx tool to examine compositional high-throughput sequence data with Welch's t-test☆15Mar 7, 2019Updated 7 years ago
- Speedy versions of phyloseq functions☆50Apr 21, 2024Updated 2 years ago