Stray has been renamed fido, development continues at jsilve24/fido
☆23Jan 26, 2022Updated 4 years ago
Alternatives and similar repositories for stray
Users that are interested in stray are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Metabolic modeling tutorial for EMBO practical course: Metabolite and species dynamics in microbial communities 2022☆13Jan 8, 2024Updated 2 years ago
- A manuscript exploring the effects of taxonomic bias on microbiome differential-abundance analysis.☆12Oct 30, 2023Updated 2 years ago
- Multinomial Logistic-Normal Models (really fast)☆20Apr 18, 2026Updated 2 weeks ago
- Code for effectively dealing with running CmdStan... from R.... because reasons...☆13Jun 17, 2022Updated 3 years ago
- An ultrafast optimal aligner for mapping large NGS data to large genome databases.☆59Jul 9, 2024Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆28Feb 27, 2024Updated 2 years ago
- Programs and documentation for the SAMSA pipeline, version 1.0☆16Dec 16, 2019Updated 6 years ago
- Vanilla regression methods for microbiome differential abundance analysis☆61Nov 3, 2020Updated 5 years ago
- SHallow shOtGUN profiler☆52Mar 4, 2022Updated 4 years ago
- Convert digital images into georeferenced rasters☆14Apr 25, 2026Updated last week
- sensitive and precise assembly of short sequencing reads☆167Oct 11, 2024Updated last year
- An RNA pipeline built on top of ADAM. Apache 2 licensed.☆19Jan 19, 2018Updated 8 years ago
- R package for microbiome analysis. Provides helper functions for common workflows ranging from preprocessing to visualization.☆25Jan 24, 2024Updated 2 years ago
- ☆19Mar 8, 2026Updated last month
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Mapping in R workshop demonstrating how to use R/ RStudio to work with spatial data for mapping and visualization.☆11Dec 2, 2021Updated 4 years ago
- Visualise the Results of Inferential Statistics using 'ggplot2'☆13Jun 12, 2023Updated 2 years ago
- Implements the model described in "Identification, Interpretability, and Bayesian Word Embeddings"☆19Jun 5, 2019Updated 6 years ago
- integrative pathway analysis with modern PCA methodology and gene selection☆11Jun 29, 2023Updated 2 years ago
- Count Regression for Correlated Observations with the Beta-binomial☆107Nov 13, 2025Updated 5 months ago
- R package with tools for distance metrics☆18Nov 24, 2025Updated 5 months ago
- Alignment against all pre-2019 bacteria on laptops within a few hours (former MOF-Search)☆41Apr 17, 2024Updated 2 years ago
- Files for lawcite biblatex style☆10Apr 17, 2023Updated 3 years ago
- Categorical Variational Autoencoders☆24Feb 4, 2022Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A paper about causal inference with Bayesian modeling☆15Jan 21, 2020Updated 6 years ago
- ✅ PeopleBudget is an open-source tool for hosting participatory budgets elections at the local level.☆10Oct 4, 2022Updated 3 years ago
- Python API for Genomic Data Commons☆20Sep 27, 2016Updated 9 years ago
- ALDEx tool to examine compositional high-throughput sequence data with Welch's t-test☆15Mar 7, 2019Updated 7 years ago
- Material for my proposed StanCon talk☆20Oct 15, 2020Updated 5 years ago
- Annotation of Metabolite Origin via Networks: A tool for predicting putative metabolite origins for microbes or between microbes and host…☆26Jan 15, 2026Updated 3 months ago
- Book: Practical Probabilistic Machine Learning in Python☆10Apr 3, 2021Updated 5 years ago
- Dimensionality reduction for exponential family data by extending PCA☆23Aug 4, 2018Updated 7 years ago
- 记录R中填过的那些坑☆16Oct 11, 2020Updated 5 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Visualize differentially ranked features (taxa, metabolites, ...) and their log-ratios across samples☆34Apr 4, 2025Updated last year
- Protein Alignment and Detection Interface☆60Apr 1, 2024Updated 2 years ago
- Deblur is a greedy deconvolution algorithm based on known read error profiles.☆99Mar 8, 2025Updated last year
- Query Search Portals and AI Assistants from R☆81May 27, 2025Updated 11 months ago
- Code for my personal website☆11Mar 29, 2021Updated 5 years ago
- This is the course material for my 2020 Bayesian inference class at NYU.☆12Apr 27, 2022Updated 4 years ago
- ☆13Aug 15, 2025Updated 8 months ago