Population and Evolutionary Genetics Analysis System
☆29Apr 4, 2026Updated 2 months ago
Alternatives and similar repositories for pegas
Users that are interested in pegas are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Tools for Evolutionary Quantitative Genetics☆14Sep 5, 2025Updated 9 months ago
- Modification of BayesAss 3.0.4 to allow handling of large SNP datasets☆17Feb 19, 2022Updated 4 years ago
- R Port of psmc☆17Mar 16, 2023Updated 3 years ago
- Scripts for population genetics analysis☆21Nov 10, 2022Updated 3 years ago
- Analysis of Phylogenetics and Evolution☆74Jun 2, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆11May 10, 2025Updated last year
- adegenet: a R package for the multivariate analysis of genetic markers☆201Feb 7, 2025Updated last year
- Computing resources for peace of mind☆13Feb 23, 2023Updated 3 years ago
- Population assignment analysis using R☆16Jul 4, 2025Updated 11 months ago
- quickLD, a large-scale, long-range Linkage Disequilibrium analysis tool utilizing parallel CPU, GPU or heterogeneous computing.☆10Jun 10, 2022Updated 4 years ago
- babette is an R package to work with BEAST2☆46Mar 13, 2026Updated 3 months ago
- simple examples of using supervised machine learning for population genetics inference☆39Oct 26, 2017Updated 8 years ago
- SNP genotyping in polyploids☆17Aug 12, 2020Updated 5 years ago
- PedigreeSim is software that generates simulated genetic marker data of individuals in pedigreed populations. A population can consist of…☆14Apr 13, 2021Updated 5 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Auto-parameterizing QC Pipeline for Illumina sequencing runs☆18Jul 9, 2024Updated last year
- Conditional Auto-Regressive LASSO in R☆20Nov 11, 2022Updated 3 years ago
- Scripts to calculate population genetics statistics☆55Jul 20, 2018Updated 7 years ago
- phylogenetic networks using ggplot2 and ggtree☆12Updated this week
- Please switch to https://github.com/OpenGene/defastq☆29Jul 28, 2018Updated 7 years ago
- IPython notebooks to teach Genomics and Population Genetics☆21Feb 13, 2017Updated 9 years ago
- ☆12Feb 16, 2025Updated last year
- Phylogenetic Clustering (Phyloclustering)☆10Sep 6, 2023Updated 2 years ago
- Vignettes for Population Genetics in R☆26Aug 11, 2020Updated 5 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- strataG is a toolkit for haploid sequence and multilocus genetic data summaries, and analyses of population structure.☆26Jan 5, 2026Updated 5 months ago
- diveRsity: A comprehensive, general purpose population genetics analysis package.☆27Mar 8, 2026Updated 3 months ago
- Phylogenetic analysis in R☆215Jun 3, 2026Updated last week
- Minimal Assumption Genomic Inference of Coalescence☆14Aug 8, 2023Updated 2 years ago
- Microbial Populations as Clusters Of Gene Transfer☆45Dec 4, 2023Updated 2 years ago
- Source code for the program MavericK, described fully at www.bobverity.com/maverick☆12Jun 21, 2018Updated 7 years ago
- ☆10Jul 1, 2020Updated 5 years ago
- Population Assignment using Genetic, Non-genetic or Integrated Data in a Machine-learning Framework. Methods in Ecology and Evolution.…☆16Sep 12, 2025Updated 9 months ago
- 🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction☆72Sep 10, 2025Updated 9 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Multifastats: Multi-Fasta Sequence Stats. Free python-based program that, from a set of a set of 'fasta' sequences (as group or individua …☆11Feb 21, 2018Updated 8 years ago
- mist R package files☆10May 5, 2025Updated last year
- Sliding window dN/dS vs. functional protein domain comparison tool. Given VectorBase gene id inputs it will aggregate various useful Bioi…☆20Dec 10, 2024Updated last year
- reference-free estimation of ploidy level from whole genome sequencing data based on de Bruijn graph☆18Jul 26, 2023Updated 2 years ago
- ☆27Jul 28, 2016Updated 9 years ago
- ☆10Aug 12, 2018Updated 7 years ago
- Convert SNPs in VCF format to PHYLIP, NEXUS, binary NEXUS, or FASTA alignments for phylogenetic analysis☆336Jul 7, 2023Updated 2 years ago