KlausVigo / phangornLinks
Phylogenetic analysis in R
☆209Updated last week
Alternatives and similar repositories for phangorn
Users that are interested in phangorn are comparing it to the libraries listed below
Sorting:
- ☆224Updated 3 weeks ago
- adegenet: a R package for the multivariate analysis of genetic markers☆195Updated 8 months ago
- Base Classes and Functions for Phylogenetic Tree Input and Output☆103Updated 5 months ago
- Genomic Data Retrieval with R☆223Updated 2 months ago
- Interface for the Basic Local Alignment Search Tool (BLAST) - R-Package☆112Updated this week
- Count Regression for Correlated Observations with the Beta-binomial☆106Updated 6 months ago
- Parsing, Manipulation, and Visualization of Metabarcoding/Taxonomic data☆144Updated 8 months ago
- a complete reference book for treeio, tidytree and ggtree packages☆104Updated 3 years ago
- Pretty heatmaps☆265Updated 4 months ago
- Add Geom Layers On Circular Or Other Layout Tree Of “ggtree”☆93Updated 3 weeks ago
- [OFFICIAL] [CoDA] An R package to calculate proportionality and other measures for compositional data☆74Updated 3 months ago
- A primer for computational tools to analyze genetics of populations in R☆88Updated 4 years ago
- Network construction, analysis, and comparison for microbial compositional data☆170Updated 6 months ago
- Analysis of Phylogenetics and Evolution☆72Updated 4 months ago
- This tutorial runs through the basics of ggplot2 and how to make a figure ready for publication.☆54Updated 5 years ago
- A grammar of genomic data transformation☆148Updated 3 months ago
- microbiome R package☆308Updated last month
- Decorate a plot with associated information☆122Updated last month
- R package for microbiome biomarker discovery☆190Updated 7 months ago
- Pairwise multilevel comparison using adonis☆78Updated 2 years ago
- Sparse InversE Covariance estimation for Ecological Association and Statistical Inference☆215Updated 2 weeks ago
- Materials for the STAMPS 2019 course at the MBL in Woods Hole, MA, USA☆34Updated 5 years ago
- Differential abundance (DA) and correlation analyses for microbial absolute abundance data☆125Updated last month
- pathfindR: Enrichment Analysis Utilizing Active Subnetworks☆195Updated 3 weeks ago
- Grid and ggplot2 based visualization for biological data☆116Updated last week
- ☆109Updated last week
- ☆56Updated 3 years ago
- diversity estimation under ecological networks☆83Updated 2 months ago
- An R package to analyse and visualise admixture proportions from STRUCTURE, fastSTRUCTURE, TESS, ADMIXTURE etc.☆149Updated 2 years ago
- Growthcurver is an R package that fits growth curve data to a standard form of the logistic equation common in ecology and evolution whos…☆48Updated 3 years ago