KlausVigo / phangornLinks
Phylogenetic analysis in R
☆206Updated this week
Alternatives and similar repositories for phangorn
Users that are interested in phangorn are comparing it to the libraries listed below
Sorting:
- ☆221Updated last week
- Genomic Data Retrieval with R☆222Updated 4 months ago
- Network construction, analysis, and comparison for microbial compositional data☆167Updated 2 months ago
- Base Classes and Functions for Phylogenetic Tree Input and Output☆102Updated last month
- Parsing, Manipulation, and Visualization of Metabarcoding/Taxonomic data☆140Updated 3 months ago
- adegenet: a R package for the multivariate analysis of genetic markers☆191Updated 3 months ago
- R package for microbiome biomarker discovery☆184Updated 3 months ago
- Count Regression for Correlated Observations with the Beta-binomial☆106Updated 2 months ago
- Analysis of Phylogenetics and Evolution☆68Updated 2 weeks ago
- Import qiime2 artifacts to R☆171Updated 5 months ago
- microbiome R package☆299Updated 5 months ago
- Interface for the Basic Local Alignment Search Tool (BLAST) - R-Package☆110Updated 4 months ago
- Add Geom Layers On Circular Or Other Layout Tree Of “ggtree”☆93Updated last month
- Pretty heatmaps☆257Updated last year
- Sparse InversE Covariance estimation for Ecological Association and Statistical Inference☆211Updated this week
- Publication-quality sequence logos in R☆213Updated 7 months ago
- An R package to analyse and visualise admixture proportions from STRUCTURE, fastSTRUCTURE, TESS, ADMIXTURE etc.☆150Updated last year
- Tools to work with variant call format files☆259Updated 3 months ago
- Visualize and annotate genomic coverage with ggplot2☆259Updated 4 months ago
- Decorate a plot with associated information☆104Updated 3 months ago
- A grammar of genomic data transformation☆146Updated 2 months ago
- Differential abundance (DA) and correlation analyses for microbial absolute abundance data☆123Updated 2 weeks ago
- A primer for computational tools to analyze genetics of populations in R☆86Updated 4 years ago
- ☆174Updated 4 years ago
- Grid and ggplot2 based visualization for biological data☆113Updated last year
- Workshop materials for SFSU SCIP 2022.☆12Updated 2 years ago
- ➡️️➡️️⬅️️➡️️ Draw gene arrow maps in ggplot2☆549Updated 3 weeks ago
- karyoploteR - An R/Bioconductor package to plot arbitrary data along the genome☆314Updated last week
- Growthcurver is an R package that fits growth curve data to a standard form of the logistic equation common in ecology and evolution whos…☆47Updated 3 years ago
- Pairwise multilevel comparison using adonis☆76Updated 2 years ago