Alternatives and similar repositories for breedR

Users that are interested in breedR are comparing it to the libraries listed below

• grunwaldlab / poppr
  🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction
  ☆72Updated 3 months ago
• thibautjombart / adegenet
  adegenet: a R package for the multivariate analysis of genetic markers
  ☆198Updated 10 months ago
• royfrancis / pophelper
  An R package to analyse and visualise admixture proportions from STRUCTURE, fastSTRUCTURE, TESS, ADMIXTURE etc.
  ☆149Updated 2 years ago
• yzhlinscau / AFEchidna
  Added functions for Echidna in R
  ☆11Updated 2 years ago
• grunwaldlab / Population_Genetics_in_R
  A primer for computational tools to analyze genetics of populations in R
  ☆89Updated 4 years ago
• liamrevell / phytools
  ☆227Updated 2 weeks ago
• MrodesBook / Examples_R
  ☆24Updated 2 years ago
• EricArcher / strataG
  strataG is a toolkit for haploid sequence and multilocus genetic data summaries, and analyses of population structure.
  ☆26Updated last month
• thierrygosselin / radiator
  RADseq Data Exploration, Manipulation and Visualization using R
  ☆59Updated 3 months ago
• jgx65 / hierfstat
  the hierfstat package
  ☆25Updated last year
• mighster / BLUPs_Heritability
  ☆16Updated 6 years ago
• simjoly / CourseComparativeMethods
  Examples of application of comparative methods in R
  ☆60Updated 3 years ago
• perpdgo / lme4GS
  lme4 for Genomic Selection
  ☆18Updated 4 years ago
• TiagoOlivoto / metan
  Package for multi-environment trial analysis
  ☆37Updated last year
• gdlc / BGLR-R
  ☆110Updated 2 months ago
• liamrevell / learnPopGen
  initial commit
  ☆26Updated 2 years ago
• cran / sommer
   This is a read-only mirror of the CRAN R package repository. sommer — Solving Mixed Model Equations in R. Homepage: https://github.com/…
  ☆16Updated 2 weeks ago
• lvclark / polyRAD
  Genotype Calling with Uncertainty from Sequencing Data in Polyploids 🍌🍓🥔🍠🥝
  ☆31Updated 9 months ago
• gauravsk / ranacapa
  R package for downstream analysis for anacapa eDNA pipeline
  ☆22Updated 4 years ago
• grunwaldlab / metacoder
  Parsing, Manipulation, and Visualization of Metabarcoding/Taxonomic data
  ☆145Updated 10 months ago
• mblstamps / stamps2019
  Materials for the STAMPS 2019 course at the MBL in Woods Hole, MA, USA
  ☆34Updated 6 years ago
• cooplab / Popgen_EVE102_2012
  Pdfs of slides from 2018 popgen course
  ☆36Updated 7 years ago
• cooplab / Popgen_teaching_code
  ☆56Updated 3 years ago
• maize-genetics / rTASSEL
  R front-end for TASSEL 5
  ☆31Updated last week
• adw96 / breakaway
  Species richness with high diversity
  ☆68Updated 4 months ago
• zhengxwen / SNPRelate
  R package: parallel computing toolset for relatedness and principal component analysis of SNP data (Development version only)
  ☆110Updated last month
• YuLab-SMU / ggtreeExtra
  Add Geom Layers On Circular Or Other Layout Tree Of “ggtree”
  ☆95Updated last month
• pmartinezarbizu / pairwiseAdonis
  Pairwise multilevel comparison using adonis
  ☆80Updated 2 years ago
• CerrenRichards / ggplot2-for-publications
  This tutorial runs through the basics of ggplot2 and how to make a figure ready for publication.
  ☆54Updated 5 years ago
• const-ae / tidygenomics
  Tidy Verbs for Dealing with Genomic Data Frames https://const-ae.github.io/tidygenomics/
  ☆104Updated 4 years ago