famuvie / breedRView external linksLinks
Statistical methods for forest genetic resources analysts
☆37Jan 16, 2026Updated last month
Alternatives and similar repositories for breedR
Users that are interested in breedR are comparing it to the libraries listed below
Sorting:
- This is a read-only mirror of the CRAN R package repository. sommer — Solving Mixed Model Equations in R. Homepage: https://github.com/…☆16Nov 26, 2025Updated 2 months ago
- Added functions for Echidna in R☆11Apr 14, 2023Updated 2 years ago
- Multivariate Gaussian Models for Genomic and Pedigree Data☆14May 23, 2020Updated 5 years ago
- https://filippob.github.io/introduction_to_gwas/☆22Jul 2, 2025Updated 7 months ago
- ☆24Oct 16, 2023Updated 2 years ago
- lme4 for Genomic Selection☆18Jan 26, 2026Updated 3 weeks ago
- A R package for Participatory Plant Breeding statisticial analyses☆10Apr 30, 2021Updated 4 years ago
- The Dockerfiles for breeDBase☆12Feb 9, 2026Updated last week
- R Package rrBLUP in Python☆26Mar 26, 2024Updated last year
- An R package for plotting GWAS results from the GAPIT package☆14Oct 9, 2025Updated 4 months ago
- ☆12Updated this week
- ☆11Jan 31, 2018Updated 8 years ago
- Fitting latent factor mixed models☆13Jun 12, 2020Updated 5 years ago
- Perform GWAS using the FarmCPU model.☆24Dec 14, 2024Updated last year
- ☆113Oct 3, 2025Updated 4 months ago
- Figures for the CHM13 T2T SD paper.☆10Sep 12, 2021Updated 4 years ago
- ☆13Mar 22, 2022Updated 3 years ago
- Provide tools for collecting environmental data from GIS-based platforms,enabling environmental characterization studies, providing envir…☆32Mar 27, 2025Updated 10 months ago
- blupADC:An useful tool for animal and plant breeding☆32Nov 22, 2024Updated last year
- ☆15Mar 7, 2025Updated 11 months ago
- Random stuff for BLUPF90 programs☆17Aug 28, 2023Updated 2 years ago
- Suit of R-scripts to perform landscape genomic analyses☆13May 25, 2020Updated 5 years ago
- An efficient multi-locus mixed-model approach for genome-wide association studies in structured populations☆14Mar 6, 2018Updated 7 years ago
- ☆16Jun 14, 2019Updated 6 years ago
- A suite of tools for processing genotype data. Includes calling genotypes from .idat to plink (ped), sample/case-control variant QC steps…☆15Feb 5, 2026Updated last week
- ☆17Sep 20, 2020Updated 5 years ago
- Tidying and visualizing for animal pedigrees☆19Updated this week
- Heritability in plant breeding - R and SAS code examples☆39Feb 27, 2021Updated 4 years ago
- A collection of scripts to run GWAS, regional, gene-oriented, or per-variant analyses.☆18Jan 21, 2026Updated 3 weeks ago
- ☆21Apr 2, 2015Updated 10 years ago
- BLINK: A Package for Next Level of Genome Wide Association Studies with Both Individuals and Markers in Millions☆39Mar 24, 2025Updated 10 months ago
- R package for fitting high-dimensional multivariate linear mixed effect models☆37Oct 20, 2025Updated 3 months ago
- Structure Harvester is a program for parsing the output of Pritchard's STRUCTURE and for performing the Evanno method.☆34Jul 9, 2022Updated 3 years ago
- An efficient multi-locus mixed-model approach for genome-wide association studies in structured populations☆17Mar 27, 2018Updated 7 years ago
- A guide to manipulating genotypic data across the common formats: VCF, EIGENSTRAT and PLINK (PACKEDPED) files. Includes how to convert be…☆23Aug 9, 2023Updated 2 years ago
- Genome-wide association studies (GWAS) for ordered categorical phenotypes☆23Updated this week
- Kinship (genetic relatedness) using GBS (genotyping-by-sequencing) with Depth adjustment☆21Oct 28, 2025Updated 3 months ago
- ☆55Nov 19, 2025Updated 2 months ago
- Codebook from my GWAS cookbook☆193May 26, 2022Updated 3 years ago