Variant catalogue pipeline
☆26Jan 30, 2026Updated 5 months ago
Alternatives and similar repositories for Variant_catalogue_pipeline
Users that are interested in Variant_catalogue_pipeline are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Browser-based tool for visualizing and analyzing germline copy number variants in genomic data☆12Nov 7, 2024Updated last year
- A bioinformatics best-practice analysis pipeline for calling structural variants (SVs), copy number variants (CNVs) and repeat region exp…☆27Jun 25, 2026Updated last month
- Scripts and code for Kākāpō genomic data☆14Sep 4, 2023Updated 2 years ago
- Highly Open Workflow for Annotation & Ranking toward genomic variant Discovery☆13Jul 6, 2026Updated 2 weeks ago
- ☆29Feb 17, 2021Updated 5 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Allele-Specific Quantification of Structural Variations in Cancer Genomes☆19Mar 5, 2019Updated 7 years ago
- Cancer Predisposition Sequencing Reporter (CPSR)☆64Updated this week
- A nextflow pipeline for calling and annotating small germline variants from short DNA reads for WES and WGS data☆13Updated this week
- structural variant database software☆49Updated this week
- dv-trio provides a pipeline to call variants for a trio (father-mother-child) using DeepVariants [1]. Genomic Variant Calling Files (gVCF…☆11Feb 3, 2021Updated 5 years ago
- A nextflow pipeline for calling exome CNVs☆14Updated this week
- Tools for haplotype-wise reconstruction of pseudomolecules☆23Sep 5, 2025Updated 10 months ago
- A variational autoencoder-based approach for copy number variation inference using single-cell transcriptomics☆13Mar 11, 2024Updated 2 years ago
- AI-MARRVEL (AIM) is an AI system for rare genetic disorder diagnosis☆22May 12, 2026Updated 2 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Tests Allelic Expression data for extreme imbalance w.r.t. population☆11Oct 8, 2021Updated 4 years ago
- ☆23Dec 4, 2025Updated 7 months ago
- Longread PacBio sequencing processing for WGS and PureTarget☆16Updated this week
- Python implementation and field-tool for automated pipeline launching through Tower CLI (beta)☆36May 29, 2026Updated last month
- ☆12Oct 11, 2024Updated last year
- Workflow Execution Service Backend☆21Updated this week
- A set of tools to annotate VCF files with expression and readcount data☆31Updated this week
- multi_tbx: a simple tool for indexing VCF files and extract variant records for variant data stored in multiple VCF files.☆10Jan 7, 2022Updated 4 years ago
- ChimPipe: Accurate detection of fusion genes and transcription-induced chimeras from RNA-seq data☆15Jan 22, 2026Updated 6 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- TIDDIT - structural variant calling☆80Updated this week
- Somatic workflow for Kids-First☆15Updated this week
- A web tool that helps biomedical researchers understand how their work is being used by others, by analyzing the content in papers that c…☆13Oct 19, 2018Updated 7 years ago
- ☆13Apr 16, 2026Updated 3 months ago
- ☆14Jan 24, 2024Updated 2 years ago
- Robust detection of clinically relevant structural and copy number variation from whole genome sequencing data☆75Sep 4, 2024Updated last year
- Nextflow pipelines to process long read ONT and/or pacbio HiFi data☆18Jun 19, 2026Updated last month
- Run multiple programs to check if a VCF is usable☆11May 15, 2020Updated 6 years ago
- ☆12May 6, 2021Updated 5 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A standalone and free application to explore genetics variations from VCF file☆108Mar 31, 2026Updated 3 months ago
- The present study is finalised to determine the most advanced models in the literature capable of producing new high-quality molecules st…☆10Aug 31, 2021Updated 4 years ago
- CAGE-sequencing analysis pipeline with trimming, alignment and counting of CAGE tags.☆11Updated this week
- A bioinformatics pipeline to phase and impute genetic data☆32Jul 6, 2026Updated 2 weeks ago
- This is a pipeline for variant annotation in the diagnosis of rare genetic disorders. It relies on open source data and has instructions …☆18Mar 20, 2023Updated 3 years ago
- A quick workflow to get researchers started with the bioinformatic pipeline used in the Environmental Metagenomics program.☆13Feb 17, 2025Updated last year
- Assembly and intrahost / low-frequency variant calling for viral samples☆15Feb 12, 2020Updated 6 years ago