tbrown91 / SimBacLinks
Source code for SimBac, a bacterial genome simulator
☆13Updated 9 months ago
Alternatives and similar repositories for SimBac
Users that are interested in SimBac are comparing it to the libraries listed below
Sorting:
- Classify sequencing reads using MinHash.☆48Updated 5 years ago
- gia: Genomic Interval Arithmetic☆65Updated 10 months ago
- Given a set of kmers (fasta format) and a set of sequences (fasta format), this tool will extract the sequences containing the kmers.☆21Updated last year
- Symmetric DUST for finding low-complexity regions in DNA sequences☆42Updated last year
- Filter of Pairwise Alignement☆44Updated 3 years ago
- Bioinformatics Open Source Sequence machine☆33Updated last year
- exploring viral genome assembly with variation graph tools☆20Updated 5 years ago
- fastest GTF/GFF-to-BED converter chilling around☆25Updated last month
- Construct a Physical Map from Linked Reads☆18Updated last year
- Minimizer-based assembly scaffolding and mapping using long reads☆42Updated 8 months ago
- A bit-packed k-mer representation (and relevant utilities) for rust☆48Updated 11 months ago
- A bioinformatics tool written in Rust to find palindromic sequences in DNA☆35Updated 4 months ago
- a toolset for fast DNA read set matching and assembly using a new type of reduced kmer☆37Updated 3 years ago
- Reference genome quality scores