Alternatives and similar repositories for machineboss

Users that are interested in machineboss are comparing it to the libraries listed below

• lh3 / pre-pe
  Preprocessing paired-end reads produced with experiment-specific protocols
  ☆32Updated 7 years ago
• SamStudio8 / majora2
  Malleable All-seeing Journal Of Research Artifacts
  ☆35Updated 2 years ago
• EvolBioInf / fur
  Find Unique genomic Regions
  ☆30Updated 3 weeks ago
• arshajii / lava
  LAVA: Lightweight Assignment of Variant Alleles
  ☆17Updated 7 years ago
• niemasd / ViralMSA
  Reference-guided multiple sequence alignment of viral genomes
  ☆70Updated 4 months ago
• kamimrcht / REINDEER
  REINDEER REad Index for abuNDancE quERy
  ☆56Updated 3 months ago
• nickloman / poredb
  ☆18Updated 8 years ago
• fulcrumgenomics / fgpyo
  Quality of life improvements for Bioinformatics in Python.
  ☆31Updated last week
• bcgsc / SSAKE
  🍶 Genome assembly with short sequence reads
  ☆26Updated last year
• ekg / viral-assembly
  exploring viral genome assembly with variation graph tools
  ☆20Updated 5 years ago
• pirovc / metameta
  ☆23Updated 6 years ago
• wwood / OrfM
  simple and not slow ORF caller
  ☆21Updated 7 years ago
• bioforensics / pytaxonkit
  Python bindings for the TaxonKit library
  ☆40Updated 3 months ago
• aquaskyline / Skyhawk
  An Artificial Neural Network-based discriminator for validating clinically significant genomic variants
  ☆35Updated last year
• brentp / fraguracy
  overlapping bases in read-pairs from a fragment indicate accuracy and reveal error-prone sites
  ☆33Updated 4 months ago
• quinlan-lab / pathoscore
  pathoscore evaluates variant pathogenicity tools and scores.
  ☆22Updated 3 years ago
• rhpvorderman / sequali
  Fast sequencing data quality metrics
  ☆28Updated last month
• edawson / rkmh
  Classify sequencing reads using MinHash.
  ☆48Updated 5 years ago
• mol-evol / panGPT
  A Generative Pre-Trained Transformer Package for Pangenomes
  ☆53Updated 4 months ago
• myriad-opensource / samwell
  Samwell: a python package for using genomic files... well
  ☆20Updated 3 years ago
• will-rowe / hulk
  Histosketching Using Little Kmers
  ☆56Updated 2 years ago
• marcus1487 / nanoraw
  Genome guided re-segmention and visualization for raw nanopore sequencing data.
  ☆47Updated 6 years ago
• rega-cev / virulign
  VIRULIGN: fast codon-correct alignment and annotation of viral genomes
  ☆35Updated 4 years ago
• zhaoc1 / nanoflow
  Bioinformatics pipeline for nanopore sequencing data
  ☆11Updated 6 years ago
• phac-nml / biohansel
  Rapidly subtype microbial genomes using single-nucleotide variant (SNV) subtyping schemes
  ☆28Updated 10 months ago
• thekaplanlab / msabrowser
  🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations
  ☆35Updated last year
• prophyle / prophyle
  Accurate, resource-frugal and deterministic DNA sequence classifier.
  ☆36Updated last week
• iqbal-lab / cortex
  reference free variant assembly
  ☆34Updated 2 years ago
• CuiMiao-HIT / miniSNV
  ☆19Updated 10 months ago
• InscriptaLabs / BioCantor
  ☆22Updated 2 years ago