sunnyisgalaxy / moabsLinks
A comprehensive, accurate and efficient solution for analysis of large scale base-resolution DNA methylation data
☆17Updated 4 years ago
Alternatives and similar repositories for moabs
Users that are interested in moabs are comparing it to the libraries listed below
Sorting:
- A Perl/R pipeline for plotting metagenes☆37Updated 4 years ago
- Fork of the Polysolver project☆33Updated 6 years ago
- A list of alternative splicing analysis resources☆46Updated 9 months ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆41Updated 3 years ago
- A tool for accurately detecting actively translating ORFs from Ribo-seq data☆39Updated 11 months ago
- Convert Counts to Fragments per Kilobase of Transcript per Million (FPKM)☆63Updated 4 years ago
- direct comparison of circular and linear RNA expression☆23Updated 4 years ago
- Tutorial Website☆61Updated 4 years ago
- Workflows for processing RNA data for germline short variant discovery with GATK v4 and related tools☆84Updated 4 years ago
- perl cworld module and collection of utility/analysis scripts for C data (3C, 4C, 5C, Hi-C)☆67Updated 6 years ago
- REDItools are python scripts to investigate RNA editing at genomic scale.☆69Updated 5 months ago
- DCC uses output from the STAR read mapper to systematically detect back-splice junctions in next-generation sequencing data. DCC applies …☆37Updated 3 years ago
- A quickstart tool for AmpliconArchitect. Enables all steps (alignment, CNV calling, seed interval detection) prior to running AmpliconArc…☆76Updated last week
- A modular, containerized pipeline for ATAC-seq data processing☆61Updated 3 months ago
- Identifying genome-wide translated open reading frames using ribosome profiling☆24Updated 2 years ago
- A method for circular DNA detection based on probabilistic mapping of ultrashort reads☆65Updated last year
- A tool for the calculation of RNA-editing index for RNA seq data☆45Updated 2 months ago
- CLIP-seq Analysis of Multi-mapped reads☆31Updated 4 years ago
- ☆20Updated 6 years ago
- RNA editing tests☆17Updated 5 years ago
- Single Cell Long Read is a suite of tools dedicated to Cell barcode / UMI assignment and analysis of highly multiplexed single cell Nanop…☆78Updated 2 years ago
- Dynamics analysis of Alternative PolyAdenylation from RNA-seq☆63Updated 2 years ago
- HiC for copy Number variation and Translocation detection☆40Updated 4 years ago
- Identifying differentially methylated regions from MethylC-seq (bisulfite-sequencing) data☆28Updated 2 years ago
- HiCorr: a Hi-C data bias-correction pipeline☆30Updated 9 months ago
- A continually expanding collection of RNA-seq tools☆53Updated 3 months ago
- Full-length transcriptome splicing and mutation analysis☆85Updated last year
- Estimation of Promoter Activity from RNA-Seq data☆56Updated 5 months ago
- An easy-to-use Hi-C data processing software supporting distributed computation.☆62Updated last year
- code associated with crane-nature-2015, 10.1038/nature14450☆36Updated 10 years ago