AAlhendi1707 / countToFPKMLinks
Convert Counts to Fragments per Kilobase of Transcript per Million (FPKM)
☆62Updated 4 years ago
Alternatives and similar repositories for countToFPKM
Users that are interested in countToFPKM are comparing it to the libraries listed below
Sorting:
- Links to ATAC-seq analysis tools☆70Updated 4 years ago
- REDItools are python scripts to investigate RNA editing at genomic scale.☆68Updated 2 months ago
- A toolset for profiling alternative splicing events in RNA-Seq data.☆82Updated 8 months ago
- From RNA-seq raw reads to enriched pathways by DEGs☆32Updated last year
- Analysis Workflow for Assay for Transposase-Accessible Chromatin using sequencing (ATAC-Seq)☆74Updated 2 years ago
- A modular, containerized pipeline for ATAC-seq data processing☆59Updated 2 weeks ago
- Workflows for processing RNA data for germline short variant discovery with GATK v4 and related tools☆80Updated 4 years ago
- HMMRATAC peak caller for ATAC-seq data☆99Updated 10 months ago
- Publication quality NGS track plotting☆114Updated 3 years ago
- Tutorial Website☆59Updated 4 years ago
- Estimate locus specific human LINE-1 expression.☆39Updated 3 weeks ago
- RNA-Seq analysis workflow☆105Updated 4 years ago
- A method for circular DNA detection based on probabilistic mapping of ultrashort reads☆66Updated last year
- fork of RSeQC python RNAseq metrics suit of tools☆49Updated 6 years ago
- Genomic Identification of Significant Targets in Cancer (GISTIC), version 2☆51Updated 3 years ago
- Dynamics analysis of Alternative PolyAdenylation from RNA-seq☆62Updated 2 years ago
- A tool for the calculation of RNA-editing index for RNA seq data☆45Updated last year
- Full-length transcriptome splicing and mutation analysis☆84Updated last year
- ☆119Updated 2 years ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆40Updated 3 years ago
- ☆59Updated 2 months ago
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆42Updated 4 years ago
- A list of alternative splicing analysis resources☆46Updated 6 months ago
- tools to find circRNAs in RNA-seq data☆44Updated 7 years ago
- Quantification of transposable element expression using RNA-seq☆77Updated last year
- ☆78Updated 5 months ago
- A Perl/R pipeline for plotting metagenes☆37Updated 4 years ago
- An R package to Identify, Annoatate and Visialize Isoform Switches with Functional Consequences (from RNA-seq data)☆117Updated 8 months ago
- A quickstart tool for AmpliconArchitect. Performs all preliminary steps (alignment, CNV calling, seed interval detection) required prior …☆71Updated 3 weeks ago
- Code and analysis pipeline for Smart-seq3 (Hagemann-Jensen et al. 2020).☆54Updated 4 years ago