PMBio / limix-backup
☆45Updated 8 years ago
Alternatives and similar repositories for limix-backup:
Users that are interested in limix-backup are comparing it to the libraries listed below
- ☆43Updated 8 years ago
- Scalable RNA-seq analysis☆73Updated 4 years ago
- Modeling and correcting fragment sequence bias for RNA-seq☆24Updated 10 months ago
- Rapid Mapping-based Isoform Quantification from RNA-Seq Reads☆126Updated 2 years ago
- utilities for working with IGV: opening files remotely in either desktop IGV or a web viewer (igv.js), creating screenshots, etc.☆48Updated 5 years ago
- Tools to handle reads sequenced with unique molecular identifiers (UMIs).☆30Updated 7 years ago
- Parallel merging, squaring off and ensemble calling for genomic variants☆20Updated 5 years ago
- A software for the multispecies design of CRISPR/Cas9 libraries☆35Updated 2 years ago
- A hierarchical multiscale model for inferring transcription factor binding from chromatin accessibility data.☆26Updated 8 years ago
- a wee tool for random access into BGZF files.☆84Updated 6 years ago
- Fast fusion detection using kallisto☆80Updated 5 months ago
- Response to blog post about Salmon☆37Updated 7 years ago
- Exon-exon splice junctions across SRA☆40Updated 3 years ago
- Accessing Intra-Tumor Heterogeneity and Tracking Longitudinal and Spatial Clonal Evolutionary History by Next-Generation Sequencing.☆68Updated 3 years ago
- Stupid Simple Elastic Compute Cloud☆16Updated last year
- ☆22Updated 8 years ago
- Tools for next-generation sequencing analysis☆88Updated 5 years ago
- Analysis from kallisto paper☆32Updated 9 years ago
- Toil workflows for common genomic pipelines☆33Updated 5 years ago
- Epigenetic Variability and Transcription Factor Motifs Analysis Pipeline☆30Updated 7 years ago
- ☆37Updated 4 years ago
- R package for extracting mutation signatures from a list of somatic mutations☆37Updated 5 years ago
- Infrastructure code to support DNA pipeline☆38Updated 9 years ago
- Companion repo for ExAC paper, 2015☆33Updated 8 years ago
- Preprocessing of single-cell RNA-Seq (deprecated)☆62Updated 5 years ago
- High-throughput gene to knowledge mapping through massive integration of public sequencing data.☆31Updated 6 years ago
- easy access to benchmark datasets☆50Updated 6 years ago
- Q ChIP-seq peak caller☆18Updated 9 months ago
- What's The Function of these genes?☆22Updated 8 years ago
- An algorithm for clonal tree reconstruction from multi-sample cancer sequencing data☆14Updated 7 years ago