bogdanlab / h2-GRELinks
Implemention of Accurate estimation of SNP-heritability from biobank-scale data irrespective of genetic architecture. (Nature Genetics 2019)
☆15Updated 6 years ago
Alternatives and similar repositories for h2-GRE
Users that are interested in h2-GRE are comparing it to the libraries listed below
Sorting:
- Variational Inference of Polygenic Risk Scores☆28Updated 5 months ago
- Data and code for the Effector index☆14Updated 5 years ago
- Suite of heritability and genetic correlation estimation tools for exome-sequencing data☆34Updated 7 months ago
- PRS pipeline using PRS_CS☆14Updated 4 months ago
- Learn and validate subtypes from multiple traits☆20Updated 4 years ago
- Software to perform multi-ancestry SNP fine-mapping on molecular data☆27Updated 2 months ago
- Code for creating cell-type-specific regulatory element annotation files☆18Updated last year
- FOCUS: Fine-mapping Of CaUsal gene Sets☆46Updated 2 years ago
- ☆23Updated 2 years ago
- LASSO for GWAS with summary statistics☆77Updated 5 years ago
- Toy simulations and analyses of heritability and genetic differences☆11Updated last year
- GWAS gold standards repository☆38Updated last year
- Every Gene Ever Annotated in published GWAS☆49Updated 2 years ago
- Sample code for ldsc analyses in UKBB☆31Updated 2 years ago
- causal TWAS (cTWAS)☆46Updated 3 weeks ago
- Cross-population weighting framework to improve genetic risk prediction in ancestrally diverse populations☆16Updated last year
- metaUSAT is a data-adaptive statistical approach for testing genetic associations of multiple traits from single/multiple studies using u…☆20Updated 4 years ago
- Refining the impact of genetic evidence on clinical success☆27Updated last year
- Imputation of parental genotypes, inference of sibling IBD segments, family based GWAS, and polygenic score analyses.☆35Updated 2 weeks ago
- DENTIST (Detecting Errors iN analyses of summary staTISTics) is a QC tool for summary-data-based analyses.☆26Updated 2 years ago
- Scripts used for generating Neale Lab UKB results☆20Updated 3 years ago
- ☆13Updated 2 years ago
- An R package for fast and efficient visualizing of GWAS results using Q-Q and Manhattan plots directly from PLINK output files.☆39Updated 2 weeks ago
- mantis-ml: Stochastic semi-supervised learning to prioritise genes from high throughput genomic screens☆30Updated last year
- Older repo for MRLocus. See new website for software usage guide:☆15Updated 2 years ago
- A rapido and lightweight method for PGS computation☆14Updated 8 months ago
- ldshrink: a one-stop R package for shrinkage estimation of linkage disequilibrium☆13Updated 4 years ago
- RSparsePro for robust fine-mapping in the presence of LD mismatch☆12Updated 11 months ago
- ☆34Updated last year
- ☆36Updated 4 years ago