khramts / assocplots
☆32Updated 3 years ago
Related projects ⓘ
Alternatives and complementary repositories for assocplots
- ☆24Updated 5 months ago
- JARVIS: a comprehensive deep learning framework to prioritise non-coding variants in whole genomes☆22Updated 3 weeks ago
- Extracting disease-specific genomic coordinates from GWAS catalog☆19Updated 4 years ago
- RepEnrich is a method to estimate repetitive element enrichment using high-throughput sequencing data.☆26Updated 2 years ago
- Genomes on the Cloud, Mapping & Variant Calling Pipelines☆32Updated 7 years ago
- A tool to plot significant regions of GWAS☆29Updated last year
- GTEx analysis scripts☆20Updated 7 years ago
- CADD scripts release for offline scoring. For more information about CADD, please visit our website☆74Updated last week
- Disambiguation algorithm for reads aligned to human and mouse genomes using Tophat or BWA mem☆29Updated 6 years ago
- Software to compute reproducibility and quality scores for Hi-C data☆44Updated 5 years ago
- Report reverse and ambiguous strand SNPs in GWAS data☆33Updated 5 years ago
- Robust Allele Specific Quantification and quality controL☆37Updated 2 years ago
- ☆40Updated 6 years ago
- ☆33Updated 2 months ago
- ☆37Updated 4 years ago
- ChIP-seq DC and QC Pipeline☆34Updated 3 years ago
- Cross-population fine-mapping☆27Updated 2 weeks ago
- Repository to reproduce analyses from the GTEx V6P Rare Variation Manuscript☆18Updated 7 years ago
- processes GoT amplicon data and generates a table of metrics☆26Updated 2 years ago
- DNA copy number detection from off-target sequence data☆30Updated 6 years ago
- chia pet analysis software☆25Updated 5 years ago
- An R package for predicting HR deficiency from mutation contexts☆27Updated last year
- CLAMMS is a scalable tool for detecting common and rare copy number variants from whole-exome sequencing data.☆29Updated 3 years ago
- Single Cell Caller (SCcaller) - Identify single nucleotide variations (SNVs) from single cell sequencing data☆34Updated last year
- VEP Plugin to annotate high-impact five prime UTR variants☆24Updated 2 months ago
- Base-wise aggregation and functional prediction for human non-coding regulatory variants☆15Updated 11 months ago
- Linking GWAS studies to genes through cis-regulatory datasets☆39Updated last year
- SPP - R package for analysis of ChIP-seq and other functional sequencing data☆39Updated 3 years ago
- Scripts to run copynumber variation calls on tumor and normal BAM files using Varscan2☆28Updated 6 years ago
- software package for integrative genetic association analysis☆32Updated last year