khramts / assocplotsLinks
☆33Updated 4 years ago
Alternatives and similar repositories for assocplots
Users that are interested in assocplots are comparing it to the libraries listed below
Sorting:
- ☆40Updated 7 years ago
- Report reverse and ambiguous strand SNPs in GWAS data☆33Updated 6 years ago
- ☆27Updated 7 months ago
- A wrapper for liftOver for converting plink genotype data between different genome reference builds☆52Updated 6 years ago
- Create regional association plots from GWAS or meta-analysis☆61Updated 5 years ago
- OUTRIDER: OUTlier in RNA-seq fInDER is an R-based framework to find aberrantly expressed genes in RNA-seq data☆54Updated 2 months ago
- A tool to plot significant regions of GWAS☆29Updated 2 years ago
- Convert GWAS summary statistics to VCF☆48Updated 2 years ago
- Notebooks and scripts for reproducing analyses and figures from the V8 GTEx Consortium paper☆44Updated last year
- ☆24Updated last year
- ☆63Updated 4 years ago
- Cross-population fine-mapping☆41Updated last year
- GTEx analysis scripts☆20Updated 8 years ago
- Genomic Association Tester☆35Updated 2 years ago
- A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizin…☆20Updated 8 years ago
- Functional genomics and genome-wide association studies☆69Updated 7 years ago
- ☆22Updated 2 years ago
- Read PLINK BED/BIM/FAM files into R☆44Updated 4 years ago
- Software to compute reproducibility and quality scores for Hi-C data☆50Updated 6 years ago
- Manhattan plot Generator☆24Updated 5 years ago
- Fuji plot—a circos representation of multiple GWAS results—☆92Updated 7 months ago
- software package for integrative genetic association analysis☆35Updated 2 years ago
- a set of NGS pipelines☆24Updated this week
- From QC to summary statistics☆17Updated 5 years ago
- Full-spectrum copy number variation detection by high-throughput DNA sequencing☆40Updated 4 years ago
- A collection of tools to deal with Bisulfite-seq/NOMe-seq (SNP/Methylation calling: BisSNP; HMM segmentation: DMNTools; Visualization/Clu…☆32Updated 4 years ago
- ☆48Updated 5 months ago
- (DEPRECATED) epic: diffuse domain ChIP-Seq caller based on SICER☆31Updated 7 years ago
- This is a pipeline for variant annotation in the diagnosis of rare genetic disorders. It relies on open source data and has instructions …☆18Updated 2 years ago
- Fork of ricopili for development of pipeline for family-based data☆19Updated 6 months ago