☆34Mar 7, 2021Updated 4 years ago
Alternatives and similar repositories for assocplots
Users that are interested in assocplots are comparing it to the libraries listed below
Sorting:
- ☆13May 16, 2016Updated 9 years ago
- Classes for storing very large GWAS data sets and annotation, and functions for GWAS data cleaning and analysis☆18Mar 18, 2025Updated 11 months ago
- Fine-mapping with infinitesimal effects☆20May 27, 2025Updated 9 months ago
- GWAS QC, PCA, haplotype phasing, genotype imputation☆20Aug 13, 2025Updated 6 months ago
- A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics data☆29Aug 2, 2022Updated 3 years ago
- An R package for plotting GWAS results from the GAPIT package☆14Oct 9, 2025Updated 4 months ago
- Calculate AUC based on GWAS summary statistics only☆10Jun 29, 2018Updated 7 years ago
- PhenomeXcan: mapping the genome to the phenome through the transcriptome☆11Jun 28, 2020Updated 5 years ago
- Pipeline for multiplex computing of statistical colocalization via COLOC between GWAS and QTL data.☆21Aug 19, 2025Updated 6 months ago
- Example jobs for popular applications on HCC clusters.☆20Feb 10, 2026Updated 3 weeks ago
- Fast manhattenplots using ggplot2☆13Feb 19, 2024Updated 2 years ago
- Plotly BioVisualization 🎯 Interactive Needle and Manhattan Plots & Alignment Viewer☆11Feb 28, 2020Updated 6 years ago
- Python Scripts for Bioinformatics☆15Apr 24, 2024Updated last year
- ☆10Feb 25, 2024Updated 2 years ago
- the miscellaneous analysis scripts used in the research of pan-Zea genome and genetics☆17Aug 25, 2022Updated 3 years ago
- GWAS SNP Regulatory Analysis Tool☆17Mar 19, 2015Updated 10 years ago
- Genomics data visualization in Python by using matplotlib.☆69Dec 27, 2023Updated 2 years ago
- Manhattan plot Generator☆24Jun 1, 2020Updated 5 years ago
- Bayesian multiple logistic regression for GWAS meta-analysis☆17Aug 20, 2025Updated 6 months ago
- Fine-mapping pipeline for Open Targets Genetics☆28Sep 6, 2022Updated 3 years ago
- This is something I have decided to do to make something good come out of the current covid situation. Here I will put the publicly avail…☆12Sep 6, 2021Updated 4 years ago
- Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 🟣☆11Apr 28, 2023Updated 2 years ago
- A GWAS fine-mapping pipeline used in CAUSALdb☆27May 1, 2022Updated 3 years ago
- ☆15Nov 17, 2025Updated 3 months ago
- A tool to plot significant regions of GWAS☆29Jan 27, 2023Updated 3 years ago
- ☆31Nov 25, 2019Updated 6 years ago
- RSS: Regression with Summary Statistics☆51Sep 16, 2024Updated last year
- An R package for creating mirrored Manhattan plots☆18Sep 30, 2022Updated 3 years ago
- A Fine-Mapping pipeline☆22Sep 13, 2019Updated 6 years ago
- A set of R functions that help faciliate a lot of tedious processing☆18Aug 31, 2018Updated 7 years ago
- A guide to manipulating genotypic data across the common formats: VCF, EIGENSTRAT and PLINK (PACKEDPED) files. Includes how to convert be…☆23Aug 9, 2023Updated 2 years ago
- My R scripts, primarily R plotting scripts + some genomics software including 16S rRNA metataxnomics and RNAseq☆12Dec 19, 2022Updated 3 years ago
- ☆24Nov 9, 2017Updated 8 years ago
- Repository☆10Oct 23, 2024Updated last year
- bioinformatics learning☆13Oct 10, 2023Updated 2 years ago
- GWAS gold standards repository☆40Nov 23, 2023Updated 2 years ago
- MODAS: Multi-Omics Data Association Study toolkit☆21Nov 21, 2024Updated last year
- Structure variants calling and genotyping scripts for pan-Zea☆22Nov 17, 2022Updated 3 years ago
- A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizin…☆20Oct 14, 2017Updated 8 years ago